Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
FOXG1P55316 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.59■□□□□ 0.09
FOXG1P55316 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXG1P55316 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.59■□□□□ 0.09
FOXG1P55316 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.59■□□□□ 0.09
FOXG1P55316 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXG1P55316 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.59■□□□□ 0.09
FOXG1P55316 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.59■□□□□ 0.09
FOXG1P55316 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.59■□□□□ 0.09
FOXG1P55316 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXG1P55316 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
FOXG1P55316 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
FOXG1P55316 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXG1P55316 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXG1P55316 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXG1P55316 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXG1P55316 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
FOXG1P55316 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
FOXG1P55316 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
FOXG1P55316 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
FOXG1P55316 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.58■□□□□ 0.09
FOXG1P55316 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.58■□□□□ 0.09
FOXG1P55316 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
FOXG1P55316 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
FOXG1P55316 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
FOXG1P55316 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
FOXG1P55316 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXG1P55316 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
FOXG1P55316 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.58■□□□□ 0.08
FOXG1P55316 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXG1P55316 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
FOXG1P55316 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.58■□□□□ 0.08
FOXG1P55316 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.58■□□□□ 0.08
FOXG1P55316 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.58■□□□□ 0.08
FOXG1P55316 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
FOXG1P55316 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
FOXG1P55316 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
FOXG1P55316 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
FOXG1P55316 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
FOXG1P55316 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXG1P55316 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXG1P55316 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
FOXG1P55316 AC067852.2-201ENST00000590513 2313 ntBASIC15.57■□□□□ 0.08
FOXG1P55316 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXG1P55316 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
FOXG1P55316 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
FOXG1P55316 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXG1P55316 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
FOXG1P55316 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXG1P55316 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXG1P55316 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXG1P55316 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.57■□□□□ 0.08
FOXG1P55316 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXG1P55316 COX5BP2-201ENST00000392354 334 ntBASIC15.57■□□□□ 0.08
FOXG1P55316 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.57■□□□□ 0.08
FOXG1P55316 AC079781.3-201ENST00000449110 356 ntBASIC15.57■□□□□ 0.08
FOXG1P55316 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.57■□□□□ 0.08
FOXG1P55316 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXG1P55316 AF238378.1-201ENST00000526806 358 ntBASIC15.57■□□□□ 0.08
FOXG1P55316 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.57■□□□□ 0.08
FOXG1P55316 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.57■□□□□ 0.08
FOXG1P55316 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.57■□□□□ 0.08
FOXG1P55316 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.57■□□□□ 0.08
FOXG1P55316 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.57■□□□□ 0.08
FOXG1P55316 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.57■□□□□ 0.08
FOXG1P55316 AP001269.4-201ENST00000609611 512 ntBASIC15.57■□□□□ 0.08
FOXG1P55316 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXG1P55316 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXG1P55316 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXG1P55316 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXG1P55316 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
FOXG1P55316 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
FOXG1P55316 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXG1P55316 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.57■□□□□ 0.08
FOXG1P55316 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
FOXG1P55316 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXG1P55316 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
FOXG1P55316 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXG1P55316 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXG1P55316 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXG1P55316 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.56■□□□□ 0.08
FOXG1P55316 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms