Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ACLYP53396 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ACLYP53396 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.49■□□□□ 0.71
ACLYP53396 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACLYP53396 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACLYP53396 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.49■□□□□ 0.71
ACLYP53396 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ACLYP53396 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.49■□□□□ 0.71
ACLYP53396 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ACLYP53396 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.49■□□□□ 0.71
ACLYP53396 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ACLYP53396 STK19B-204ENST00000512515 211 ntBASIC19.49■□□□□ 0.71
ACLYP53396 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ACLYP53396 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.49■□□□□ 0.71
ACLYP53396 AC097637.2-201ENST00000624096 1997 ntBASIC19.49■□□□□ 0.71
ACLYP53396 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACLYP53396 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ACLYP53396 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.49■□□□□ 0.71
ACLYP53396 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACLYP53396 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACLYP53396 AL031598.1-201ENST00000561511 1773 ntBASIC19.49■□□□□ 0.71
ACLYP53396 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ACLYP53396 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.49■□□□□ 0.71
ACLYP53396 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ACLYP53396 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
ACLYP53396 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ACLYP53396 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACLYP53396 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACLYP53396 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACLYP53396 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACLYP53396 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACLYP53396 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACLYP53396 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACLYP53396 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ACLYP53396 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACLYP53396 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.48■□□□□ 0.71
ACLYP53396 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ACLYP53396 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.48■□□□□ 0.71
ACLYP53396 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.48■□□□□ 0.71
ACLYP53396 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ACLYP53396 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.48■□□□□ 0.71
ACLYP53396 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ACLYP53396 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.48■□□□□ 0.71
ACLYP53396 SPCS2P1-201ENST00000561636 679 ntBASIC19.48■□□□□ 0.71
ACLYP53396 AL353135.1-201ENST00000606729 504 ntBASIC19.48■□□□□ 0.71
ACLYP53396 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
ACLYP53396 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.48■□□□□ 0.71
ACLYP53396 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.48■□□□□ 0.71
ACLYP53396 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACLYP53396 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ACLYP53396 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.48■□□□□ 0.71
ACLYP53396 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACLYP53396 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACLYP53396 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.47■□□□□ 0.71
ACLYP53396 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.47■□□□□ 0.71
ACLYP53396 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.47■□□□□ 0.71
ACLYP53396 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACLYP53396 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.47■□□□□ 0.71
ACLYP53396 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACLYP53396 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACLYP53396 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ACLYP53396 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ACLYP53396 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.47■□□□□ 0.71
ACLYP53396 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.47■□□□□ 0.71
ACLYP53396 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.47■□□□□ 0.71
ACLYP53396 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.47■□□□□ 0.71
ACLYP53396 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ACLYP53396 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
ACLYP53396 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.47■□□□□ 0.71
ACLYP53396 AC091812.2-201ENST00000619081 385 ntBASIC19.47■□□□□ 0.71
ACLYP53396 AC007064.4-201ENST00000637740 555 ntBASIC19.47■□□□□ 0.71
ACLYP53396 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACLYP53396 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.47■□□□□ 0.71
ACLYP53396 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACLYP53396 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACLYP53396 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ACLYP53396 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ACLYP53396 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ACLYP53396 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACLYP53396 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.47■□□□□ 0.71
ACLYP53396 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACLYP53396 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACLYP53396 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACLYP53396 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ACLYP53396 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
ACLYP53396 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
ACLYP53396 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.46■□□□□ 0.71
ACLYP53396 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACLYP53396 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACLYP53396 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACLYP53396 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACLYP53396 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACLYP53396 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACLYP53396 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.46■□□□□ 0.71
ACLYP53396 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.46■□□□□ 0.71
ACLYP53396 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.46■□□□□ 0.71
ACLYP53396 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.46■□□□□ 0.71
ACLYP53396 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.46■□□□□ 0.71
ACLYP53396 AC023141.13-201ENST00000604991 943 ntBASIC19.46■□□□□ 0.71
ACLYP53396 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms