Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EFNB2P52799 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
EFNB2P52799 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.4■□□□□ 0.06
EFNB2P52799 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.4■□□□□ 0.06
EFNB2P52799 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EFNB2P52799 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EFNB2P52799 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.39■□□□□ 0.06
EFNB2P52799 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
EFNB2P52799 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
EFNB2P52799 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.39■□□□□ 0.05
EFNB2P52799 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
EFNB2P52799 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
EFNB2P52799 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
EFNB2P52799 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.39■□□□□ 0.05
EFNB2P52799 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
EFNB2P52799 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.39■□□□□ 0.05
EFNB2P52799 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.39■□□□□ 0.05
EFNB2P52799 AC097488.1-201ENST00000507834 756 ntBASIC15.39■□□□□ 0.05
EFNB2P52799 KRT8P7-201ENST00000533003 1432 ntBASIC15.39■□□□□ 0.05
EFNB2P52799 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
EFNB2P52799 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
EFNB2P52799 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.39■□□□□ 0.05
EFNB2P52799 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.39■□□□□ 0.05
EFNB2P52799 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.39■□□□□ 0.05
EFNB2P52799 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
EFNB2P52799 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
EFNB2P52799 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
EFNB2P52799 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.38■□□□□ 0.05
EFNB2P52799 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.38■□□□□ 0.05
EFNB2P52799 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
EFNB2P52799 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
EFNB2P52799 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
EFNB2P52799 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
EFNB2P52799 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
EFNB2P52799 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.38■□□□□ 0.05
EFNB2P52799 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 AC113347.1-201ENST00000413321 391 ntBASIC15.38■□□□□ 0.05
EFNB2P52799 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.38■□□□□ 0.05
EFNB2P52799 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.38■□□□□ 0.05
EFNB2P52799 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.38■□□□□ 0.05
EFNB2P52799 AP005242.2-201ENST00000580065 1175 ntBASIC15.38■□□□□ 0.05
EFNB2P52799 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.38■□□□□ 0.05
EFNB2P52799 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.38■□□□□ 0.05
EFNB2P52799 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.38■□□□□ 0.05
EFNB2P52799 HLA-J-201ENST00000462773 1622 ntBASIC15.38■□□□□ 0.05
EFNB2P52799 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.38■□□□□ 0.05
EFNB2P52799 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
EFNB2P52799 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
EFNB2P52799 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
EFNB2P52799 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
EFNB2P52799 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
EFNB2P52799 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
EFNB2P52799 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
EFNB2P52799 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
EFNB2P52799 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
EFNB2P52799 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
EFNB2P52799 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
EFNB2P52799 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
EFNB2P52799 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
EFNB2P52799 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
EFNB2P52799 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
EFNB2P52799 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
EFNB2P52799 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
EFNB2P52799 AC005521.1-201ENST00000393351 872 ntBASIC15.37■□□□□ 0.05
EFNB2P52799 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.37■□□□□ 0.05
EFNB2P52799 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms