Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CLCNKAP51800 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.45■□□□□ 0.38
CLCNKAP51800 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLCNKAP51800 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCNKAP51800 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCNKAP51800 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCNKAP51800 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCNKAP51800 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCNKAP51800 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCNKAP51800 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCNKAP51800 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCNKAP51800 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCNKAP51800 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLCNKAP51800 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCNKAP51800 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.44■□□□□ 0.38
CLCNKAP51800 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCNKAP51800 FAM220CP-201ENST00000395253 831 ntBASIC17.44■□□□□ 0.38
CLCNKAP51800 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCNKAP51800 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCNKAP51800 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCNKAP51800 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCNKAP51800 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCNKAP51800 AC122714.2-201ENST00000502787 707 ntBASIC17.44■□□□□ 0.38
CLCNKAP51800 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCNKAP51800 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCNKAP51800 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
CLCNKAP51800 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.44■□□□□ 0.38
CLCNKAP51800 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.44■□□□□ 0.38
CLCNKAP51800 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.44■□□□□ 0.38
CLCNKAP51800 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.44■□□□□ 0.38
CLCNKAP51800 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.44■□□□□ 0.38
CLCNKAP51800 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCNKAP51800 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.44■□□□□ 0.38
CLCNKAP51800 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCNKAP51800 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLCNKAP51800 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCNKAP51800 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.44■□□□□ 0.38
CLCNKAP51800 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCNKAP51800 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLCNKAP51800 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCNKAP51800 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CLCNKAP51800 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.43■□□□□ 0.38
CLCNKAP51800 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLCNKAP51800 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.43■□□□□ 0.38
CLCNKAP51800 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLCNKAP51800 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CLCNKAP51800 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCNKAP51800 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.43■□□□□ 0.38
CLCNKAP51800 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CLCNKAP51800 AC007967.3-201ENST00000434308 558 ntBASIC17.43■□□□□ 0.38
CLCNKAP51800 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.43■□□□□ 0.38
CLCNKAP51800 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCNKAP51800 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.43■□□□□ 0.38
CLCNKAP51800 AC104692.2-201ENST00000603054 253 ntBASIC17.43■□□□□ 0.38
CLCNKAP51800 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCNKAP51800 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCNKAP51800 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.43■□□□□ 0.38
CLCNKAP51800 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.43■□□□□ 0.38
CLCNKAP51800 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.43■□□□□ 0.38
CLCNKAP51800 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLCNKAP51800 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.43■□□□□ 0.38
CLCNKAP51800 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCNKAP51800 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLCNKAP51800 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLCNKAP51800 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCNKAP51800 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCNKAP51800 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCNKAP51800 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms