Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RAB5CP51148 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5CP51148 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5CP51148 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5CP51148 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5CP51148 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5CP51148 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5CP51148 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RAB5CP51148 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RAB5CP51148 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5CP51148 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5CP51148 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5CP51148 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.33□□□□□ -0.12
RAB5CP51148 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB5CP51148 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5CP51148 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RAB5CP51148 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB5CP51148 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5CP51148 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5CP51148 PRSS44-201ENST00000515154 1146 ntBASIC14.33□□□□□ -0.12
RAB5CP51148 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5CP51148 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5CP51148 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5CP51148 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.33□□□□□ -0.12
RAB5CP51148 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5CP51148 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB5CP51148 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB5CP51148 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RAB5CP51148 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5CP51148 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB5CP51148 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5CP51148 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5CP51148 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5CP51148 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5CP51148 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5CP51148 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RAB5CP51148 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5CP51148 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB5CP51148 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB5CP51148 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB5CP51148 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB5CP51148 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RAB5CP51148 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB5CP51148 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB5CP51148 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RAB5CP51148 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 CYP2T1P-202ENST00000641596 2535 ntBASIC14.32□□□□□ -0.12
RAB5CP51148 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB5CP51148 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB5CP51148 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.32□□□□□ -0.12
RAB5CP51148 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB5CP51148 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
RAB5CP51148 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB5CP51148 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB5CP51148 HLA-A-209ENST00000638375 975 ntBASIC14.32□□□□□ -0.12
RAB5CP51148 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
RAB5CP51148 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAB5CP51148 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB5CP51148 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB5CP51148 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
RAB5CP51148 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB5CP51148 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5CP51148 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB5CP51148 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
RAB5CP51148 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB5CP51148 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB5CP51148 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
RAB5CP51148 AL513523.2-202ENST00000427283 2040 ntBASIC14.31□□□□□ -0.12
RAB5CP51148 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB5CP51148 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 AL109659.2-201ENST00000606809 1674 ntBASIC14.31□□□□□ -0.12
RAB5CP51148 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB5CP51148 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB5CP51148 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB5CP51148 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB5CP51148 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB5CP51148 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms