Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.66■□□□□ 0.1
CX3CR1P49238 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CX3CR1P49238 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CX3CR1P49238 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 TERF1P1-201ENST00000311003 1181 ntBASIC15.66■□□□□ 0.1
CX3CR1P49238 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CX3CR1P49238 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.66■□□□□ 0.1
CX3CR1P49238 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.66■□□□□ 0.1
CX3CR1P49238 SPDYE15P-201ENST00000424157 909 ntBASIC15.66■□□□□ 0.1
CX3CR1P49238 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.66■□□□□ 0.1
CX3CR1P49238 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.66■□□□□ 0.1
CX3CR1P49238 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.66■□□□□ 0.1
CX3CR1P49238 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.66■□□□□ 0.1
CX3CR1P49238 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.66■□□□□ 0.1
CX3CR1P49238 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CX3CR1P49238 AC079602.3-201ENST00000623931 403 ntBASIC15.66■□□□□ 0.1
CX3CR1P49238 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 OR6D1P-203ENST00000641209 4860 ntBASIC15.66■□□□□ 0.1
CX3CR1P49238 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CX3CR1P49238 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.66■□□□□ 0.1
CX3CR1P49238 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CX3CR1P49238 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.66■□□□□ 0.1
CX3CR1P49238 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CX3CR1P49238 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.65■□□□□ 0.1
CX3CR1P49238 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 KRT89P-201ENST00000620027 1478 ntBASIC15.65■□□□□ 0.1
CX3CR1P49238 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.65■□□□□ 0.1
CX3CR1P49238 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.65■□□□□ 0.1
CX3CR1P49238 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.65■□□□□ 0.1
CX3CR1P49238 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
CX3CR1P49238 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 AL355312.1-201ENST00000407115 2176 ntBASIC15.65■□□□□ 0.1
CX3CR1P49238 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
CX3CR1P49238 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CX3CR1P49238 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.65■□□□□ 0.1
CX3CR1P49238 BX664615.1-201ENST00000443558 458 ntBASIC15.65■□□□□ 0.1
CX3CR1P49238 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.65■□□□□ 0.1
CX3CR1P49238 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.65■□□□□ 0.1
CX3CR1P49238 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.65■□□□□ 0.1
CX3CR1P49238 AC139887.4-201ENST00000607877 719 ntBASIC15.65■□□□□ 0.1
CX3CR1P49238 AC116407.2-201ENST00000613639 860 ntBASIC15.65■□□□□ 0.1
CX3CR1P49238 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CX3CR1P49238 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CX3CR1P49238 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CX3CR1P49238 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CX3CR1P49238 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CX3CR1P49238 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.65■□□□□ 0.1
CX3CR1P49238 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.65■□□□□ 0.1
CX3CR1P49238 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.65■□□□□ 0.1
CX3CR1P49238 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CX3CR1P49238 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.65■□□□□ 0.1
CX3CR1P49238 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CX3CR1P49238 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.1
CX3CR1P49238 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
CX3CR1P49238 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CX3CR1P49238 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CR1P49238 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CR1P49238 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.64■□□□□ 0.09
CX3CR1P49238 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CR1P49238 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CX3CR1P49238 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CX3CR1P49238 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CR1P49238 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CR1P49238 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CR1P49238 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.64■□□□□ 0.09
CX3CR1P49238 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.64■□□□□ 0.09
CX3CR1P49238 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CR1P49238 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.64■□□□□ 0.09
CX3CR1P49238 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.64■□□□□ 0.09
CX3CR1P49238 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CX3CR1P49238 FAM8A6P-201ENST00000407496 1135 ntBASIC15.64■□□□□ 0.09
CX3CR1P49238 KRT18P48-201ENST00000434763 852 ntBASIC15.64■□□□□ 0.09
CX3CR1P49238 KRT18P65-201ENST00000439811 1286 ntBASIC15.64■□□□□ 0.09
CX3CR1P49238 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CX3CR1P49238 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.64■□□□□ 0.09
CX3CR1P49238 YBX1P2-201ENST00000489612 999 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms