Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNI2P48788 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.06■□□□□ 0.96
TNNI2P48788 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.06■□□□□ 0.96
TNNI2P48788 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNI2P48788 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
TNNI2P48788 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.06■□□□□ 0.96
TNNI2P48788 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.06■□□□□ 0.96
TNNI2P48788 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.06■□□□□ 0.96
TNNI2P48788 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.06■□□□□ 0.96
TNNI2P48788 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNI2P48788 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.06■□□□□ 0.96
TNNI2P48788 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
TNNI2P48788 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.06■□□□□ 0.96
TNNI2P48788 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.06■□□□□ 0.96
TNNI2P48788 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.06■□□□□ 0.96
TNNI2P48788 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TNNI2P48788 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.06■□□□□ 0.96
TNNI2P48788 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNI2P48788 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNI2P48788 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TNNI2P48788 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNI2P48788 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNI2P48788 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNI2P48788 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TNNI2P48788 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNI2P48788 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNNI2P48788 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TNNI2P48788 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TNNI2P48788 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TNNI2P48788 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TNNI2P48788 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNNI2P48788 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
TNNI2P48788 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TNNI2P48788 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNI2P48788 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNI2P48788 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TNNI2P48788 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNI2P48788 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.05■□□□□ 0.96
TNNI2P48788 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.05■□□□□ 0.96
TNNI2P48788 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.05■□□□□ 0.96
TNNI2P48788 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNI2P48788 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.05■□□□□ 0.96
TNNI2P48788 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
TNNI2P48788 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNNI2P48788 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TNNI2P48788 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNNI2P48788 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNI2P48788 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNNI2P48788 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.05■□□□□ 0.96
TNNI2P48788 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TNNI2P48788 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNNI2P48788 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
TNNI2P48788 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.04■□□□□ 0.96
TNNI2P48788 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.04■□□□□ 0.96
TNNI2P48788 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.04■□□□□ 0.96
TNNI2P48788 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.04■□□□□ 0.96
TNNI2P48788 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.04■□□□□ 0.96
TNNI2P48788 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.04■□□□□ 0.96
TNNI2P48788 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.04■□□□□ 0.96
TNNI2P48788 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.04■□□□□ 0.96
TNNI2P48788 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.04■□□□□ 0.96
TNNI2P48788 AC004706.3-202ENST00000621574 984 ntBASIC21.04■□□□□ 0.96
TNNI2P48788 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.04■□□□□ 0.96
TNNI2P48788 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNNI2P48788 WIZP1-201ENST00000531444 2299 ntBASIC21.03■□□□□ 0.96
TNNI2P48788 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNI2P48788 PHGDH-209ENST00000641074 1780 ntBASIC21.03■□□□□ 0.96
TNNI2P48788 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.03■□□□□ 0.96
TNNI2P48788 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.03■□□□□ 0.96
TNNI2P48788 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNNI2P48788 AL353593.2-201ENST00000602529 1483 ntBASIC21.03■□□□□ 0.96
TNNI2P48788 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNI2P48788 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.03■□□□□ 0.96
TNNI2P48788 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNI2P48788 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.03■□□□□ 0.96
TNNI2P48788 AC211486.1-202ENST00000416371 468 ntBASIC21.03■□□□□ 0.96
TNNI2P48788 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.03■□□□□ 0.96
TNNI2P48788 AC211476.1-201ENST00000503899 468 ntBASIC21.03■□□□□ 0.96
TNNI2P48788 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.03■□□□□ 0.96
TNNI2P48788 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNNI2P48788 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNI2P48788 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
TNNI2P48788 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNNI2P48788 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNNI2P48788 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms