Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PCP4P48539 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.18□□□□□ -0.46
PCP4P48539 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
PCP4P48539 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
PCP4P48539 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.18□□□□□ -0.46
PCP4P48539 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.18□□□□□ -0.46
PCP4P48539 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
PCP4P48539 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
PCP4P48539 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.18□□□□□ -0.46
PCP4P48539 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.18□□□□□ -0.46
PCP4P48539 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.17□□□□□ -0.46
PCP4P48539 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 CICP7-201ENST00000432723 2477 ntBASIC12.17□□□□□ -0.46
PCP4P48539 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
PCP4P48539 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 USP45-205ENST00000472914 1617 ntTSL 5 BASIC12.17□□□□□ -0.46
PCP4P48539 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.17□□□□□ -0.46
PCP4P48539 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.17□□□□□ -0.46
PCP4P48539 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.17□□□□□ -0.46
PCP4P48539 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
PCP4P48539 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.17□□□□□ -0.46
PCP4P48539 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PCP4P48539 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.16□□□□□ -0.46
PCP4P48539 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
PCP4P48539 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
PCP4P48539 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
PCP4P48539 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC12.16□□□□□ -0.46
PCP4P48539 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.16□□□□□ -0.46
PCP4P48539 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.16□□□□□ -0.46
PCP4P48539 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms