Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NEDD4P46934 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEDD4P46934 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NEDD4P46934 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
NEDD4P46934 AKR1C7P-201ENST00000305623 895 ntBASIC20.92■□□□□ 0.94
NEDD4P46934 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEDD4P46934 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEDD4P46934 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEDD4P46934 FAM220CP-201ENST00000395253 831 ntBASIC20.92■□□□□ 0.94
NEDD4P46934 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEDD4P46934 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.92■□□□□ 0.94
NEDD4P46934 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.92■□□□□ 0.94
NEDD4P46934 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.92■□□□□ 0.94
NEDD4P46934 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.92■□□□□ 0.94
NEDD4P46934 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.92■□□□□ 0.94
NEDD4P46934 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.92■□□□□ 0.94
NEDD4P46934 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.92■□□□□ 0.94
NEDD4P46934 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.92■□□□□ 0.94
NEDD4P46934 AL121772.3-201ENST00000610840 674 ntBASIC20.92■□□□□ 0.94
NEDD4P46934 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.92■□□□□ 0.94
NEDD4P46934 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
NEDD4P46934 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NEDD4P46934 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEDD4P46934 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NEDD4P46934 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NEDD4P46934 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NEDD4P46934 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEDD4P46934 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NEDD4P46934 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NEDD4P46934 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NEDD4P46934 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.92■□□□□ 0.94
NEDD4P46934 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NEDD4P46934 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NEDD4P46934 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.92■□□□□ 0.94
NEDD4P46934 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.91■□□□□ 0.94
NEDD4P46934 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NEDD4P46934 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.91■□□□□ 0.94
NEDD4P46934 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NEDD4P46934 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.91■□□□□ 0.94
NEDD4P46934 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.91■□□□□ 0.94
NEDD4P46934 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NEDD4P46934 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.91■□□□□ 0.94
NEDD4P46934 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NEDD4P46934 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.91■□□□□ 0.94
NEDD4P46934 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.91■□□□□ 0.94
NEDD4P46934 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEDD4P46934 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.91■□□□□ 0.94
NEDD4P46934 AL450487.1-201ENST00000426799 995 ntBASIC20.91■□□□□ 0.94
NEDD4P46934 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEDD4P46934 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.91■□□□□ 0.94
NEDD4P46934 KRT126P-201ENST00000549467 1181 ntBASIC20.91■□□□□ 0.94
NEDD4P46934 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.91■□□□□ 0.94
NEDD4P46934 AC019129.2-201ENST00000609837 1235 ntBASIC20.91■□□□□ 0.94
NEDD4P46934 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NEDD4P46934 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEDD4P46934 BX276092.7-203ENST00000637198 1536 ntBASIC20.91■□□□□ 0.94
NEDD4P46934 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEDD4P46934 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
NEDD4P46934 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEDD4P46934 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEDD4P46934 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.91■□□□□ 0.94
NEDD4P46934 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NEDD4P46934 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NEDD4P46934 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NEDD4P46934 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEDD4P46934 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEDD4P46934 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEDD4P46934 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NEDD4P46934 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.9■□□□□ 0.94
NEDD4P46934 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEDD4P46934 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.9■□□□□ 0.94
NEDD4P46934 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEDD4P46934 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEDD4P46934 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NEDD4P46934 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.9■□□□□ 0.94
NEDD4P46934 KRT16P4-201ENST00000453883 522 ntBASIC20.9■□□□□ 0.94
NEDD4P46934 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.9■□□□□ 0.94
NEDD4P46934 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.9■□□□□ 0.94
NEDD4P46934 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.9■□□□□ 0.94
NEDD4P46934 AC091304.2-201ENST00000564639 760 ntBASIC20.9■□□□□ 0.94
NEDD4P46934 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.9■□□□□ 0.94
NEDD4P46934 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.9■□□□□ 0.94
NEDD4P46934 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.9■□□□□ 0.94
NEDD4P46934 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.9■□□□□ 0.94
NEDD4P46934 AL355312.1-201ENST00000407115 2176 ntBASIC20.9■□□□□ 0.94
NEDD4P46934 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NEDD4P46934 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.9■□□□□ 0.94
NEDD4P46934 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NEDD4P46934 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEDD4P46934 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NEDD4P46934 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEDD4P46934 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
NEDD4P46934 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NEDD4P46934 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.89■□□□□ 0.94
NEDD4P46934 LINC00304-203ENST00000565008 1864 ntBASIC20.89■□□□□ 0.94
NEDD4P46934 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
NEDD4P46934 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
NEDD4P46934 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NEDD4P46934 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms