Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP13P45452 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
MMP13P45452 KRT18P48-201ENST00000434763 852 ntBASIC18.51■□□□□ 0.55
MMP13P45452 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP13P45452 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP13P45452 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
MMP13P45452 ZNF444P1-201ENST00000559497 298 ntBASIC18.51■□□□□ 0.55
MMP13P45452 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP13P45452 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.51■□□□□ 0.55
MMP13P45452 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.51■□□□□ 0.55
MMP13P45452 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
MMP13P45452 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.51■□□□□ 0.55
MMP13P45452 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP13P45452 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP13P45452 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP13P45452 KRT89P-201ENST00000620027 1478 ntBASIC18.51■□□□□ 0.55
MMP13P45452 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP13P45452 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MMP13P45452 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.5■□□□□ 0.55
MMP13P45452 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.5■□□□□ 0.55
MMP13P45452 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.5■□□□□ 0.55
MMP13P45452 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
MMP13P45452 AL118508.1-201ENST00000613502 2345 ntBASIC18.5■□□□□ 0.55
MMP13P45452 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
MMP13P45452 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP13P45452 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP13P45452 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 AC093010.1-201ENST00000473625 1624 ntBASIC18.49■□□□□ 0.55
MMP13P45452 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP13P45452 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 MIR662-201ENST00000384847 95 ntBASIC18.49■□□□□ 0.55
MMP13P45452 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP13P45452 SPDYE13P-201ENST00000445314 798 ntBASIC18.49■□□□□ 0.55
MMP13P45452 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.49■□□□□ 0.55
MMP13P45452 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.49■□□□□ 0.55
MMP13P45452 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP13P45452 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.49■□□□□ 0.55
MMP13P45452 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.49■□□□□ 0.55
MMP13P45452 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.49■□□□□ 0.55
MMP13P45452 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
MMP13P45452 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
MMP13P45452 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP13P45452 AL121761.2-201ENST00000598007 1648 ntBASIC18.49■□□□□ 0.55
MMP13P45452 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
MMP13P45452 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.48■□□□□ 0.55
MMP13P45452 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms