Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC1A1P43005 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC1A1P43005 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC1A1P43005 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SLC1A1P43005 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC1A1P43005 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SLC1A1P43005 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC1A1P43005 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 AC117947.1-201ENST00000427448 529 ntBASIC18.62■□□□□ 0.57
SLC1A1P43005 AC005104.2-201ENST00000427818 678 ntBASIC18.62■□□□□ 0.57
SLC1A1P43005 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 HOMER2P1-201ENST00000455653 964 ntBASIC18.62■□□□□ 0.57
SLC1A1P43005 AC092597.1-201ENST00000487352 616 ntBASIC18.62■□□□□ 0.57
SLC1A1P43005 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.62■□□□□ 0.57
SLC1A1P43005 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC1A1P43005 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC1A1P43005 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC1A1P43005 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 AL353692.3-201ENST00000407031 1396 ntBASIC18.62■□□□□ 0.57
SLC1A1P43005 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC1A1P43005 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SLC1A1P43005 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SLC1A1P43005 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 AP001094.4-201ENST00000579008 2176 ntBASIC18.62■□□□□ 0.57
SLC1A1P43005 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A1P43005 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SLC1A1P43005 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
SLC1A1P43005 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SLC1A1P43005 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC1A1P43005 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC1A1P43005 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC1A1P43005 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SLC1A1P43005 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC1A1P43005 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC1A1P43005 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC1A1P43005 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC1A1P43005 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC1A1P43005 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC1A1P43005 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC1A1P43005 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
SLC1A1P43005 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.61■□□□□ 0.57
SLC1A1P43005 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC1A1P43005 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC1A1P43005 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC1A1P43005 GPR32P1-201ENST00000601788 811 ntBASIC18.61■□□□□ 0.57
SLC1A1P43005 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC1A1P43005 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC1A1P43005 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC1A1P43005 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC1A1P43005 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC1A1P43005 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC1A1P43005 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC1A1P43005 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC1A1P43005 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC1A1P43005 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC1A1P43005 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
SLC1A1P43005 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC1A1P43005 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC1A1P43005 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC1A1P43005 RNF152P1-201ENST00000397754 604 ntBASIC18.6■□□□□ 0.57
SLC1A1P43005 TSPY5P-201ENST00000426936 936 ntBASIC18.6■□□□□ 0.57
SLC1A1P43005 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms