Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 LINC00628-201ENST00000628516 1289 ntBASIC26.41■■□□□ 1.82
KDM5CP41229 BX323043.1-201ENST00000641006 1765 ntBASIC26.41■■□□□ 1.82
KDM5CP41229 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
KDM5CP41229 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
KDM5CP41229 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
KDM5CP41229 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
KDM5CP41229 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC26.4■■□□□ 1.82
KDM5CP41229 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC26.4■■□□□ 1.82
KDM5CP41229 FAM86GP-201ENST00000448322 971 ntBASIC26.4■■□□□ 1.82
KDM5CP41229 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
KDM5CP41229 HLA-J-202ENST00000469281 1241 ntBASIC26.4■■□□□ 1.82
KDM5CP41229 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC26.4■■□□□ 1.82
KDM5CP41229 MIR4745-201ENST00000577608 62 ntBASIC26.4■■□□□ 1.82
KDM5CP41229 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
KDM5CP41229 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
KDM5CP41229 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC26.4■■□□□ 1.82
KDM5CP41229 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC26.4■■□□□ 1.82
KDM5CP41229 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
KDM5CP41229 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
KDM5CP41229 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
KDM5CP41229 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC26.4■■□□□ 1.82
KDM5CP41229 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
KDM5CP41229 PHGDH-209ENST00000641074 1780 ntBASIC26.39■■□□□ 1.82
KDM5CP41229 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
KDM5CP41229 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC26.39■■□□□ 1.82
KDM5CP41229 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KDM5CP41229 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KDM5CP41229 AC244107.1-201ENST00000442033 332 ntBASIC26.39■■□□□ 1.82
KDM5CP41229 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
KDM5CP41229 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KDM5CP41229 CXCL1P1-201ENST00000502804 216 ntBASIC26.39■■□□□ 1.82
KDM5CP41229 DAD1-205ENST00000543337 501 ntTSL 3 BASIC26.39■■□□□ 1.82
KDM5CP41229 RBM7-207ENST00000544582 692 ntTSL 3 BASIC26.39■■□□□ 1.82
KDM5CP41229 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC26.39■■□□□ 1.82
KDM5CP41229 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC26.39■■□□□ 1.82
KDM5CP41229 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KDM5CP41229 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC26.39■■□□□ 1.82
KDM5CP41229 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KDM5CP41229 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC26.39■■□□□ 1.81
KDM5CP41229 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
KDM5CP41229 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
KDM5CP41229 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC26.39■■□□□ 1.81
KDM5CP41229 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC26.39■■□□□ 1.81
KDM5CP41229 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
KDM5CP41229 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
KDM5CP41229 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KDM5CP41229 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KDM5CP41229 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
KDM5CP41229 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KDM5CP41229 NEK7-201ENST00000367383 586 ntTSL 2 BASIC26.38■■□□□ 1.81
KDM5CP41229 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KDM5CP41229 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
KDM5CP41229 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KDM5CP41229 PMS2P4-201ENST00000412466 1052 ntBASIC26.38■■□□□ 1.81
KDM5CP41229 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC26.38■■□□□ 1.81
KDM5CP41229 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
KDM5CP41229 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC26.38■■□□□ 1.81
KDM5CP41229 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC26.38■■□□□ 1.81
KDM5CP41229 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC26.38■■□□□ 1.81
KDM5CP41229 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KDM5CP41229 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC26.38■■□□□ 1.81
KDM5CP41229 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC26.38■■□□□ 1.81
KDM5CP41229 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC26.38■■□□□ 1.81
KDM5CP41229 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
KDM5CP41229 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
KDM5CP41229 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KDM5CP41229 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC26.38■■□□□ 1.81
KDM5CP41229 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC26.38■■□□□ 1.81
KDM5CP41229 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC26.38■■□□□ 1.81
KDM5CP41229 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
KDM5CP41229 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC26.37■■□□□ 1.81
KDM5CP41229 MIR661-201ENST00000384842 89 ntBASIC26.37■■□□□ 1.81
KDM5CP41229 AL355306.1-201ENST00000415580 579 ntBASIC26.37■■□□□ 1.81
KDM5CP41229 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KDM5CP41229 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
KDM5CP41229 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC26.37■■□□□ 1.81
KDM5CP41229 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC26.37■■□□□ 1.81
KDM5CP41229 ACTL9-202ENST00000612068 1252 ntBASIC26.37■■□□□ 1.81
KDM5CP41229 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
KDM5CP41229 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KDM5CP41229 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KDM5CP41229 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KDM5CP41229 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
KDM5CP41229 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KDM5CP41229 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KDM5CP41229 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
KDM5CP41229 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
KDM5CP41229 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KDM5CP41229 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
KDM5CP41229 DDT-204ENST00000404092 805 ntTSL 3 BASIC26.37■■□□□ 1.81
KDM5CP41229 ACTG1P4-201ENST00000425123 1122 ntBASIC26.37■■□□□ 1.81
KDM5CP41229 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC26.37■■□□□ 1.81
KDM5CP41229 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KDM5CP41229 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KDM5CP41229 AC087641.1-201ENST00000557561 1021 ntBASIC26.37■■□□□ 1.81
KDM5CP41229 AC004449.1-201ENST00000564240 433 ntBASIC26.37■■□□□ 1.81
KDM5CP41229 AC051619.7-201ENST00000568314 623 ntBASIC26.37■■□□□ 1.81
KDM5CP41229 TMED1-207ENST00000591695 809 ntTSL 5 BASIC26.37■■□□□ 1.81
KDM5CP41229 YTHDF3-AS1-201ENST00000603538 718 ntBASIC26.37■■□□□ 1.81
KDM5CP41229 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms