Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.71■□□□□ 0.43
HMGCLP35914 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLP35914 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.71■□□□□ 0.43
HMGCLP35914 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HMGCLP35914 AC011467.2-201ENST00000598425 242 ntBASIC17.71■□□□□ 0.43
HMGCLP35914 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
HMGCLP35914 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLP35914 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLP35914 AL355312.1-201ENST00000407115 2176 ntBASIC17.71■□□□□ 0.43
HMGCLP35914 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HMGCLP35914 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HMGCLP35914 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLP35914 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCLP35914 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLP35914 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HMGCLP35914 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGCLP35914 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLP35914 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLP35914 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.42
HMGCLP35914 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HMGCLP35914 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HMGCLP35914 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HMGCLP35914 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGCLP35914 TP73-AS1-210ENST00000637775 1455 ntBASIC17.7■□□□□ 0.42
HMGCLP35914 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HMGCLP35914 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 FAM220CP-201ENST00000395253 831 ntBASIC17.7■□□□□ 0.42
HMGCLP35914 POM121L3P-201ENST00000419331 1163 ntBASIC17.7■□□□□ 0.42
HMGCLP35914 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.7■□□□□ 0.42
HMGCLP35914 AC122714.2-201ENST00000502787 707 ntBASIC17.7■□□□□ 0.42
HMGCLP35914 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.7■□□□□ 0.42
HMGCLP35914 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 LINC01451-201ENST00000623792 534 ntBASIC17.7■□□□□ 0.42
HMGCLP35914 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.7■□□□□ 0.42
HMGCLP35914 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HMGCLP35914 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.7■□□□□ 0.42
HMGCLP35914 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLP35914 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HMGCLP35914 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HMGCLP35914 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 LINC00304-203ENST00000565008 1864 ntBASIC17.69■□□□□ 0.42
HMGCLP35914 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HMGCLP35914 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.69■□□□□ 0.42
HMGCLP35914 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
HMGCLP35914 BCL2-203ENST00000589955 5011 ntBASIC17.69■□□□□ 0.42
HMGCLP35914 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.69■□□□□ 0.42
HMGCLP35914 AC005104.2-201ENST00000427818 678 ntBASIC17.69■□□□□ 0.42
HMGCLP35914 NUS1P1-201ENST00000446295 882 ntBASIC17.69■□□□□ 0.42
HMGCLP35914 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCLP35914 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCLP35914 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCLP35914 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.69■□□□□ 0.42
HMGCLP35914 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
HMGCLP35914 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLP35914 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCLP35914 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HMGCLP35914 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCLP35914 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLP35914 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLP35914 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLP35914 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLP35914 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCLP35914 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCLP35914 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCLP35914 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLP35914 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLP35914 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLP35914 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HMGCLP35914 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HMGCLP35914 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCLP35914 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.68■□□□□ 0.42
HMGCLP35914 MIR3652-201ENST00000579335 131 ntBASIC17.68■□□□□ 0.42
HMGCLP35914 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCLP35914 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLP35914 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms