Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6BP35913 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.79■■□□□ 1.08
PDE6BP35913 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.79■■□□□ 1.08
PDE6BP35913 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6BP35913 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.79■■□□□ 1.08
PDE6BP35913 AC239800.4-201ENST00000603712 296 ntBASIC21.79■■□□□ 1.08
PDE6BP35913 AL353135.1-201ENST00000606729 504 ntBASIC21.79■■□□□ 1.08
PDE6BP35913 AC093512.1-201ENST00000617969 520 ntBASIC21.79■■□□□ 1.08
PDE6BP35913 AC092902.6-201ENST00000641783 218 ntBASIC21.79■■□□□ 1.08
PDE6BP35913 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6BP35913 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6BP35913 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6BP35913 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.79■■□□□ 1.08
PDE6BP35913 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6BP35913 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6BP35913 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6BP35913 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PDE6BP35913 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6BP35913 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6BP35913 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6BP35913 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6BP35913 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6BP35913 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6BP35913 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6BP35913 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.78■■□□□ 1.08
PDE6BP35913 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6BP35913 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.78■■□□□ 1.08
PDE6BP35913 HLA-J-203ENST00000494367 1087 ntBASIC21.78■■□□□ 1.08
PDE6BP35913 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.78■■□□□ 1.08
PDE6BP35913 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.78■■□□□ 1.08
PDE6BP35913 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.78■■□□□ 1.08
PDE6BP35913 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6BP35913 AC105339.1-204ENST00000636249 355 ntBASIC21.78■■□□□ 1.08
PDE6BP35913 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.78■■□□□ 1.08
PDE6BP35913 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PDE6BP35913 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.78■■□□□ 1.08
PDE6BP35913 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6BP35913 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.78■■□□□ 1.08
PDE6BP35913 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE6BP35913 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PDE6BP35913 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6BP35913 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.77■■□□□ 1.08
PDE6BP35913 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE6BP35913 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE6BP35913 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6BP35913 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.77■■□□□ 1.08
PDE6BP35913 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6BP35913 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6BP35913 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE6BP35913 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6BP35913 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PDE6BP35913 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PDE6BP35913 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6BP35913 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE6BP35913 AC004461.1-201ENST00000412461 403 ntBASIC21.77■■□□□ 1.08
PDE6BP35913 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE6BP35913 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.77■■□□□ 1.08
PDE6BP35913 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.77■■□□□ 1.08
PDE6BP35913 AC025678.2-201ENST00000562061 970 ntBASIC21.77■■□□□ 1.08
PDE6BP35913 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE6BP35913 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6BP35913 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PDE6BP35913 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE6BP35913 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6BP35913 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.77■■□□□ 1.08
PDE6BP35913 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6BP35913 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.77■■□□□ 1.08
PDE6BP35913 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PDE6BP35913 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE6BP35913 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PDE6BP35913 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PDE6BP35913 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.76■■□□□ 1.07
PDE6BP35913 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6BP35913 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6BP35913 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.76■■□□□ 1.07
PDE6BP35913 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
PDE6BP35913 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6BP35913 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.76■■□□□ 1.07
PDE6BP35913 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6BP35913 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC21.76■■□□□ 1.07
PDE6BP35913 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.76■■□□□ 1.07
PDE6BP35913 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.76■■□□□ 1.07
PDE6BP35913 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.76■■□□□ 1.07
PDE6BP35913 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
PDE6BP35913 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6BP35913 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6BP35913 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
PDE6BP35913 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6BP35913 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.76■■□□□ 1.07
PDE6BP35913 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6BP35913 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6BP35913 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6BP35913 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PDE6BP35913 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE6BP35913 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE6BP35913 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.75■■□□□ 1.07
PDE6BP35913 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
PDE6BP35913 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6BP35913 LINC00982-205ENST00000420957 435 ntBASIC21.75■■□□□ 1.07
PDE6BP35913 DDX43P3-201ENST00000441064 443 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms