Protein–RNA interactions for Protein: P31268

HOXA7, Homeobox protein Hox-A7, humanhuman

Predicted RBP Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA7P31268 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
HOXA7P31268 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HOXA7P31268 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.58■□□□□ 0.88
HOXA7P31268 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HOXA7P31268 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA7P31268 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HOXA7P31268 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HOXA7P31268 AIRN-201ENST00000601203 4374 ntBASIC20.57■□□□□ 0.88
HOXA7P31268 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA7P31268 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HOXA7P31268 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HOXA7P31268 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA7P31268 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.57■□□□□ 0.88
HOXA7P31268 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA7P31268 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA7P31268 COX5BP2-201ENST00000392354 334 ntBASIC20.57■□□□□ 0.88
HOXA7P31268 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXA7P31268 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.57■□□□□ 0.88
HOXA7P31268 AC007967.2-201ENST00000432613 625 ntBASIC20.57■□□□□ 0.88
HOXA7P31268 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXA7P31268 DUTP2-201ENST00000519164 463 ntBASIC20.57■□□□□ 0.88
HOXA7P31268 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXA7P31268 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.57■□□□□ 0.88
HOXA7P31268 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXA7P31268 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.57■□□□□ 0.88
HOXA7P31268 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA7P31268 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXA7P31268 MIR1199-201ENST00000621445 119 ntBASIC20.57■□□□□ 0.88
HOXA7P31268 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA7P31268 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA7P31268 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
HOXA7P31268 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.57■□□□□ 0.88
HOXA7P31268 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
HOXA7P31268 KRT8P47-201ENST00000604727 1398 ntBASIC20.57■□□□□ 0.88
HOXA7P31268 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA7P31268 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA7P31268 AC093010.1-201ENST00000473625 1624 ntBASIC20.56■□□□□ 0.88
HOXA7P31268 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 AC004817.3-201ENST00000602957 2129 ntBASIC20.56■□□□□ 0.88
HOXA7P31268 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXA7P31268 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXA7P31268 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.56■□□□□ 0.88
HOXA7P31268 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXA7P31268 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HOXA7P31268 AC002347.1-201ENST00000569543 541 ntBASIC20.56■□□□□ 0.88
HOXA7P31268 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXA7P31268 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HOXA7P31268 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.56■□□□□ 0.88
HOXA7P31268 AC005593.1-201ENST00000624894 515 ntBASIC20.56■□□□□ 0.88
HOXA7P31268 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
HOXA7P31268 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA7P31268 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA7P31268 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA7P31268 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HOXA7P31268 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA7P31268 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HOXA7P31268 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA7P31268 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HOXA7P31268 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HOXA7P31268 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HOXA7P31268 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXA7P31268 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA7P31268 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA7P31268 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA7P31268 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA7P31268 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA7P31268 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HOXA7P31268 SLC25A6P5-201ENST00000435663 894 ntBASIC20.55■□□□□ 0.88
HOXA7P31268 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.55■□□□□ 0.88
HOXA7P31268 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
HOXA7P31268 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.55■□□□□ 0.88
HOXA7P31268 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA7P31268 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
HOXA7P31268 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA7P31268 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA7P31268 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA7P31268 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HOXA7P31268 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA7P31268 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA7P31268 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA7P31268 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA7P31268 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXA7P31268 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HOXA7P31268 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA7P31268 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA7P31268 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA7P31268 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms