Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RXRBP28702 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RXRBP28702 REEP4-207ENST00000523293 913 ntTSL 3 BASIC23.06■■□□□ 1.28
RXRBP28702 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC23.06■■□□□ 1.28
RXRBP28702 AC132938.2-201ENST00000579188 680 ntBASIC23.06■■□□□ 1.28
RXRBP28702 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
RXRBP28702 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RXRBP28702 AC073592.8-201ENST00000624126 511 ntBASIC23.06■■□□□ 1.28
RXRBP28702 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC23.06■■□□□ 1.28
RXRBP28702 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC23.06■■□□□ 1.28
RXRBP28702 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC23.06■■□□□ 1.28
RXRBP28702 AL591163.1-201ENST00000641757 987 ntBASIC23.06■■□□□ 1.28
RXRBP28702 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RXRBP28702 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RXRBP28702 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RXRBP28702 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RXRBP28702 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RXRBP28702 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.06■■□□□ 1.28
RXRBP28702 AC007541.1-201ENST00000570282 1469 ntBASIC23.05■■□□□ 1.28
RXRBP28702 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RXRBP28702 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RXRBP28702 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
RXRBP28702 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RXRBP28702 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RXRBP28702 AC092933.1-201ENST00000393644 945 ntBASIC23.05■■□□□ 1.28
RXRBP28702 BCYRN1-201ENST00000418539 200 ntBASIC23.05■■□□□ 1.28
RXRBP28702 AL353779.1-201ENST00000434793 351 ntBASIC23.05■■□□□ 1.28
RXRBP28702 API5-211ENST00000534695 560 ntTSL 5 BASIC23.05■■□□□ 1.28
RXRBP28702 POLE2-203ENST00000553805 496 ntTSL 2 BASIC23.05■■□□□ 1.28
RXRBP28702 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RXRBP28702 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC23.05■■□□□ 1.28
RXRBP28702 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RXRBP28702 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
RXRBP28702 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RXRBP28702 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
RXRBP28702 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RXRBP28702 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RXRBP28702 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
RXRBP28702 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RXRBP28702 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RXRBP28702 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.05■■□□□ 1.28
RXRBP28702 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RXRBP28702 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC23.05■■□□□ 1.28
RXRBP28702 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RXRBP28702 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.04■■□□□ 1.28
RXRBP28702 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RXRBP28702 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RXRBP28702 SNCG-201ENST00000348795 684 ntTSL 2 BASIC23.04■■□□□ 1.28
RXRBP28702 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RXRBP28702 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
RXRBP28702 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RXRBP28702 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC23.04■■□□□ 1.28
RXRBP28702 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC23.04■■□□□ 1.28
RXRBP28702 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC23.04■■□□□ 1.28
RXRBP28702 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC23.04■■□□□ 1.28
RXRBP28702 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC23.04■■□□□ 1.28
RXRBP28702 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RXRBP28702 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RXRBP28702 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RXRBP28702 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.03■■□□□ 1.28
RXRBP28702 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
RXRBP28702 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC23.03■■□□□ 1.28
RXRBP28702 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.03■■□□□ 1.28
RXRBP28702 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RXRBP28702 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RXRBP28702 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RXRBP28702 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RXRBP28702 RN7SL752P-201ENST00000463779 287 ntBASIC23.03■■□□□ 1.28
RXRBP28702 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RXRBP28702 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RXRBP28702 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RXRBP28702 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC23.03■■□□□ 1.28
RXRBP28702 AC104794.3-201ENST00000566840 1248 ntBASIC23.03■■□□□ 1.28
RXRBP28702 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RXRBP28702 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC23.03■■□□□ 1.28
RXRBP28702 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC23.03■■□□□ 1.28
RXRBP28702 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RXRBP28702 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
RXRBP28702 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RXRBP28702 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.03■■□□□ 1.28
RXRBP28702 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RXRBP28702 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RXRBP28702 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RXRBP28702 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
RXRBP28702 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
RXRBP28702 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RXRBP28702 AC132938.6-201ENST00000623828 1655 ntBASIC23.03■■□□□ 1.28
RXRBP28702 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC23.03■■□□□ 1.28
RXRBP28702 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RXRBP28702 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RXRBP28702 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RXRBP28702 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC23.02■■□□□ 1.28
RXRBP28702 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RXRBP28702 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RXRBP28702 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC23.02■■□□□ 1.28
RXRBP28702 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RXRBP28702 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RXRBP28702 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC23.02■■□□□ 1.28
RXRBP28702 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC23.02■■□□□ 1.28
RXRBP28702 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms