Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 HCG11-201ENST00000411553 5696 ntBASIC15.02■□□□□ -0
COL8A2P25067 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL8A2P25067 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.02■□□□□ -0
COL8A2P25067 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL8A2P25067 AC097374.2-201ENST00000618617 1306 ntBASIC15.02■□□□□ -0
COL8A2P25067 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL8A2P25067 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
COL8A2P25067 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL8A2P25067 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.02■□□□□ -0
COL8A2P25067 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.02■□□□□ -0
COL8A2P25067 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.02■□□□□ -0
COL8A2P25067 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.02■□□□□ -0
COL8A2P25067 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.02■□□□□ -0
COL8A2P25067 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.02■□□□□ -0
COL8A2P25067 AP001269.4-201ENST00000609611 512 ntBASIC15.02■□□□□ -0
COL8A2P25067 TP73-AS1-207ENST00000624167 988 ntBASIC15.02■□□□□ -0
COL8A2P25067 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL8A2P25067 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
COL8A2P25067 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.02□□□□□ -0.01
COL8A2P25067 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.02□□□□□ -0.01
COL8A2P25067 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
COL8A2P25067 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL8A2P25067 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL8A2P25067 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.02□□□□□ -0.01
COL8A2P25067 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
COL8A2P25067 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
COL8A2P25067 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL8A2P25067 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL8A2P25067 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL8A2P25067 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL8A2P25067 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL8A2P25067 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
COL8A2P25067 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
COL8A2P25067 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.01□□□□□ -0.01
COL8A2P25067 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.01□□□□□ -0.01
COL8A2P25067 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.01□□□□□ -0.01
COL8A2P25067 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.01□□□□□ -0.01
COL8A2P25067 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 KRT8P47-201ENST00000604727 1398 ntBASIC15.01□□□□□ -0.01
COL8A2P25067 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
COL8A2P25067 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 AC106820.2-201ENST00000563775 3264 ntBASIC15.01□□□□□ -0.01
COL8A2P25067 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
COL8A2P25067 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.01□□□□□ -0.01
COL8A2P25067 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.01□□□□□ -0.01
COL8A2P25067 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.01□□□□□ -0.01
COL8A2P25067 AC007967.3-201ENST00000434308 558 ntBASIC15.01□□□□□ -0.01
COL8A2P25067 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
COL8A2P25067 AL662844.1-201ENST00000546340 181 ntBASIC15.01□□□□□ -0.01
COL8A2P25067 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.01□□□□□ -0.01
COL8A2P25067 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.01□□□□□ -0.01
COL8A2P25067 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.01□□□□□ -0.01
COL8A2P25067 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.01□□□□□ -0.01
COL8A2P25067 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.01□□□□□ -0.01
COL8A2P25067 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
COL8A2P25067 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
COL8A2P25067 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL8A2P25067 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
COL8A2P25067 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
COL8A2P25067 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.01□□□□□ -0.01
COL8A2P25067 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15□□□□□ -0.01
COL8A2P25067 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
COL8A2P25067 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
COL8A2P25067 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 ABCD1P5-201ENST00000445663 754 ntBASIC15□□□□□ -0.01
COL8A2P25067 AC106795.1-205ENST00000512851 1056 ntBASIC15□□□□□ -0.01
COL8A2P25067 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15□□□□□ -0.01
COL8A2P25067 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
COL8A2P25067 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms