Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2B4P23634 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2B4P23634 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2B4P23634 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2B4P23634 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
ATP2B4P23634 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2B4P23634 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2B4P23634 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2B4P23634 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2B4P23634 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
ATP2B4P23634 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2B4P23634 AC135776.1-201ENST00000319817 2481 ntBASIC21.46■■□□□ 1.03
ATP2B4P23634 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
ATP2B4P23634 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.45■■□□□ 1.03
ATP2B4P23634 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP2B4P23634 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
ATP2B4P23634 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP2B4P23634 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2B4P23634 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2B4P23634 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2B4P23634 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.45■■□□□ 1.02
ATP2B4P23634 YBX1P5-201ENST00000509441 847 ntBASIC21.45■■□□□ 1.02
ATP2B4P23634 AC018845.2-201ENST00000568326 409 ntBASIC21.45■■□□□ 1.02
ATP2B4P23634 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
ATP2B4P23634 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2B4P23634 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP2B4P23634 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ATP2B4P23634 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2B4P23634 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP2B4P23634 GPR89P-201ENST00000407924 1495 ntBASIC21.45■■□□□ 1.02
ATP2B4P23634 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2B4P23634 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.44■■□□□ 1.02
ATP2B4P23634 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
ATP2B4P23634 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.44■■□□□ 1.02
ATP2B4P23634 AC009336.1-201ENST00000608941 1553 ntBASIC21.44■■□□□ 1.02
ATP2B4P23634 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
ATP2B4P23634 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ATP2B4P23634 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2B4P23634 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2B4P23634 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.44■■□□□ 1.02
ATP2B4P23634 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2B4P23634 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2B4P23634 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2B4P23634 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2B4P23634 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.44■■□□□ 1.02
ATP2B4P23634 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.44■■□□□ 1.02
ATP2B4P23634 AC002558.1-201ENST00000488906 803 ntBASIC21.44■■□□□ 1.02
ATP2B4P23634 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.44■■□□□ 1.02
ATP2B4P23634 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.44■■□□□ 1.02
ATP2B4P23634 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2B4P23634 AC097637.2-201ENST00000624096 1997 ntBASIC21.44■■□□□ 1.02
ATP2B4P23634 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.44■■□□□ 1.02
ATP2B4P23634 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2B4P23634 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.44■■□□□ 1.02
ATP2B4P23634 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ATP2B4P23634 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2B4P23634 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP2B4P23634 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2B4P23634 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.43■■□□□ 1.02
ATP2B4P23634 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.43■■□□□ 1.02
ATP2B4P23634 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.43■■□□□ 1.02
ATP2B4P23634 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.43■■□□□ 1.02
ATP2B4P23634 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.43■■□□□ 1.02
ATP2B4P23634 AL353135.1-201ENST00000606729 504 ntBASIC21.43■■□□□ 1.02
ATP2B4P23634 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
ATP2B4P23634 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2B4P23634 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2B4P23634 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2B4P23634 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ATP2B4P23634 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
ATP2B4P23634 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
ATP2B4P23634 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2B4P23634 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP2B4P23634 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2B4P23634 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2B4P23634 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP2B4P23634 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2B4P23634 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2B4P23634 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2B4P23634 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.43■■□□□ 1.02
ATP2B4P23634 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
ATP2B4P23634 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP2B4P23634 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP2B4P23634 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP2B4P23634 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ATP2B4P23634 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
ATP2B4P23634 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP2B4P23634 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP2B4P23634 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.42■■□□□ 1.02
ATP2B4P23634 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
ATP2B4P23634 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.42■■□□□ 1.02
ATP2B4P23634 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
ATP2B4P23634 MRPL20P1-201ENST00000400819 433 ntBASIC21.42■■□□□ 1.02
ATP2B4P23634 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
ATP2B4P23634 PTCHD3P3-201ENST00000403073 906 ntBASIC21.42■■□□□ 1.02
ATP2B4P23634 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
ATP2B4P23634 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.42■■□□□ 1.02
ATP2B4P23634 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.42■■□□□ 1.02
ATP2B4P23634 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.42■■□□□ 1.02
ATP2B4P23634 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms