Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN1P18031 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN1P18031 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.83■□□□□ 0.6
PTPN1P18031 DDX43P3-201ENST00000441064 443 ntBASIC18.83■□□□□ 0.6
PTPN1P18031 SAPCD2P3-201ENST00000455031 850 ntBASIC18.83■□□□□ 0.6
PTPN1P18031 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN1P18031 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN1P18031 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN1P18031 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.83■□□□□ 0.6
PTPN1P18031 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.83■□□□□ 0.6
PTPN1P18031 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN1P18031 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN1P18031 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN1P18031 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN1P18031 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN1P18031 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PTPN1P18031 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN1P18031 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.83■□□□□ 0.6
PTPN1P18031 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PTPN1P18031 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.82■□□□□ 0.6
PTPN1P18031 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN1P18031 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN1P18031 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN1P18031 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN1P18031 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN1P18031 AF238378.1-201ENST00000526806 358 ntBASIC18.82■□□□□ 0.6
PTPN1P18031 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN1P18031 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PTPN1P18031 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PTPN1P18031 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN1P18031 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN1P18031 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PTPN1P18031 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PTPN1P18031 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN1P18031 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN1P18031 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN1P18031 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN1P18031 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN1P18031 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PTPN1P18031 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PTPN1P18031 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTPN1P18031 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PTPN1P18031 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PTPN1P18031 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PTPN1P18031 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTPN1P18031 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PTPN1P18031 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.81■□□□□ 0.6
PTPN1P18031 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN1P18031 ABCD1P5-201ENST00000445663 754 ntBASIC18.81■□□□□ 0.6
PTPN1P18031 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN1P18031 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.81■□□□□ 0.6
PTPN1P18031 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN1P18031 AP001269.4-201ENST00000609611 512 ntBASIC18.81■□□□□ 0.6
PTPN1P18031 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN1P18031 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTPN1P18031 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTPN1P18031 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PTPN1P18031 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PTPN1P18031 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN1P18031 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PTPN1P18031 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN1P18031 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN1P18031 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN1P18031 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PTPN1P18031 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms