Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
SMPD1P17405 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SMPD1P17405 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SMPD1P17405 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.71■□□□□ 0.75
SMPD1P17405 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD1P17405 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.71■□□□□ 0.75
SMPD1P17405 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD1P17405 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.7■□□□□ 0.74
SMPD1P17405 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.7■□□□□ 0.74
SMPD1P17405 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD1P17405 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.7■□□□□ 0.74
SMPD1P17405 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD1P17405 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD1P17405 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD1P17405 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD1P17405 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.7■□□□□ 0.74
SMPD1P17405 PRSS29P-201ENST00000440800 595 ntBASIC19.7■□□□□ 0.74
SMPD1P17405 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.7■□□□□ 0.74
SMPD1P17405 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD1P17405 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD1P17405 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.7■□□□□ 0.74
SMPD1P17405 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SMPD1P17405 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD1P17405 AL596442.2-201ENST00000610240 980 ntBASIC19.7■□□□□ 0.74
SMPD1P17405 AL513190.1-201ENST00000621254 727 ntBASIC19.7■□□□□ 0.74
SMPD1P17405 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.7■□□□□ 0.74
SMPD1P17405 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD1P17405 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.7■□□□□ 0.74
SMPD1P17405 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD1P17405 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD1P17405 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD1P17405 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD1P17405 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD1P17405 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.69■□□□□ 0.74
SMPD1P17405 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD1P17405 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD1P17405 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD1P17405 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD1P17405 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SMPD1P17405 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.69■□□□□ 0.74
SMPD1P17405 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.69■□□□□ 0.74
SMPD1P17405 YBX1P5-201ENST00000509441 847 ntBASIC19.69■□□□□ 0.74
SMPD1P17405 STK19B-204ENST00000512515 211 ntBASIC19.69■□□□□ 0.74
SMPD1P17405 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.69■□□□□ 0.74
SMPD1P17405 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SMPD1P17405 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD1P17405 AC116407.2-201ENST00000613639 860 ntBASIC19.69■□□□□ 0.74
SMPD1P17405 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SMPD1P17405 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SMPD1P17405 BX276092.7-203ENST00000637198 1536 ntBASIC19.69■□□□□ 0.74
SMPD1P17405 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.69■□□□□ 0.74
SMPD1P17405 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.69■□□□□ 0.74
SMPD1P17405 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD1P17405 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.69■□□□□ 0.74
SMPD1P17405 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
SMPD1P17405 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
SMPD1P17405 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD1P17405 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.68■□□□□ 0.74
SMPD1P17405 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
SMPD1P17405 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.68■□□□□ 0.74
SMPD1P17405 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.68■□□□□ 0.74
SMPD1P17405 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.68■□□□□ 0.74
SMPD1P17405 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
SMPD1P17405 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.68■□□□□ 0.74
SMPD1P17405 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.68■□□□□ 0.74
SMPD1P17405 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.68■□□□□ 0.74
SMPD1P17405 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.68■□□□□ 0.74
SMPD1P17405 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
SMPD1P17405 MIR4469-201ENST00000583919 79 ntBASIC19.68■□□□□ 0.74
SMPD1P17405 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.68■□□□□ 0.74
SMPD1P17405 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.68■□□□□ 0.74
SMPD1P17405 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.68■□□□□ 0.74
SMPD1P17405 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SMPD1P17405 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.68■□□□□ 0.74
SMPD1P17405 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD1P17405 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD1P17405 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD1P17405 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD1P17405 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.67■□□□□ 0.74
SMPD1P17405 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SMPD1P17405 AC097637.2-201ENST00000624096 1997 ntBASIC19.67■□□□□ 0.74
SMPD1P17405 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SMPD1P17405 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD1P17405 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD1P17405 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
SMPD1P17405 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms