Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.07■□□□□ 0.8
COL11A1P12107 AC090164.3-201ENST00000610780 2143 ntBASIC20.07■□□□□ 0.8
COL11A1P12107 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A1P12107 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.07■□□□□ 0.8
COL11A1P12107 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A1P12107 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
COL11A1P12107 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A1P12107 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.06■□□□□ 0.8
COL11A1P12107 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.06■□□□□ 0.8
COL11A1P12107 ADH5P3-201ENST00000433842 1137 ntBASIC20.06■□□□□ 0.8
COL11A1P12107 AP006288.1-201ENST00000446065 395 ntBASIC20.06■□□□□ 0.8
COL11A1P12107 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A1P12107 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
COL11A1P12107 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.06■□□□□ 0.8
COL11A1P12107 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A1P12107 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A1P12107 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL11A1P12107 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
COL11A1P12107 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A1P12107 AC097637.2-201ENST00000624096 1997 ntBASIC20.06■□□□□ 0.8
COL11A1P12107 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.06■□□□□ 0.8
COL11A1P12107 AL138781.2-201ENST00000617896 1843 ntBASIC20.06■□□□□ 0.8
COL11A1P12107 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL11A1P12107 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL11A1P12107 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A1P12107 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A1P12107 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A1P12107 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A1P12107 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A1P12107 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A1P12107 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
COL11A1P12107 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.06■□□□□ 0.8
COL11A1P12107 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.06■□□□□ 0.8
COL11A1P12107 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.06■□□□□ 0.8
COL11A1P12107 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
COL11A1P12107 AL078644.1-201ENST00000609881 752 ntBASIC20.06■□□□□ 0.8
COL11A1P12107 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
COL11A1P12107 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A1P12107 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL11A1P12107 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
COL11A1P12107 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COL11A1P12107 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL11A1P12107 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
COL11A1P12107 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COL11A1P12107 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.05■□□□□ 0.8
COL11A1P12107 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.05■□□□□ 0.8
COL11A1P12107 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.05■□□□□ 0.8
COL11A1P12107 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL11A1P12107 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COL11A1P12107 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.05■□□□□ 0.8
COL11A1P12107 AC087163.2-201ENST00000457299 853 ntBASIC20.05■□□□□ 0.8
COL11A1P12107 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.05■□□□□ 0.8
COL11A1P12107 IGHV3-52-201ENST00000519770 353 ntBASIC20.05■□□□□ 0.8
COL11A1P12107 MIR3687-2-201ENST00000577708 61 ntBASIC20.05■□□□□ 0.8
COL11A1P12107 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.05■□□□□ 0.8
COL11A1P12107 MIR3687-1-201ENST00000614492 61 ntBASIC20.05■□□□□ 0.8
COL11A1P12107 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL11A1P12107 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
COL11A1P12107 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL11A1P12107 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL11A1P12107 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.05■□□□□ 0.8
COL11A1P12107 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.05■□□□□ 0.8
COL11A1P12107 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL11A1P12107 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A1P12107 AP002414.1-201ENST00000391405 1147 ntBASIC20.04■□□□□ 0.8
COL11A1P12107 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A1P12107 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.04■□□□□ 0.8
COL11A1P12107 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.04■□□□□ 0.8
COL11A1P12107 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.04■□□□□ 0.8
COL11A1P12107 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
COL11A1P12107 AC004790.2-201ENST00000623588 572 ntBASIC20.04■□□□□ 0.8
COL11A1P12107 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A1P12107 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A1P12107 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
COL11A1P12107 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A1P12107 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.04■□□□□ 0.8
COL11A1P12107 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.04■□□□□ 0.8
COL11A1P12107 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A1P12107 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A1P12107 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.04■□□□□ 0.8
COL11A1P12107 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COL11A1P12107 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.04■□□□□ 0.8
COL11A1P12107 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.04■□□□□ 0.8
COL11A1P12107 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.04■□□□□ 0.8
COL11A1P12107 IGHV3-65-201ENST00000523210 341 ntBASIC20.04■□□□□ 0.8
COL11A1P12107 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.04■□□□□ 0.8
COL11A1P12107 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.04■□□□□ 0.8
COL11A1P12107 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.04■□□□□ 0.8
COL11A1P12107 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.04■□□□□ 0.8
COL11A1P12107 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COL11A1P12107 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A1P12107 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A1P12107 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.03■□□□□ 0.8
COL11A1P12107 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.03■□□□□ 0.8
COL11A1P12107 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL11A1P12107 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A1P12107 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A1P12107 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
COL11A1P12107 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
COL11A1P12107 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms