Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC30.84■■■□□ 2.53
TOP2AP11388 AC099522.2-201ENST00000607001 744 ntBASIC30.84■■■□□ 2.53
TOP2AP11388 AC009093.7-201ENST00000623853 1223 ntBASIC30.84■■■□□ 2.53
TOP2AP11388 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TOP2AP11388 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
TOP2AP11388 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TOP2AP11388 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TOP2AP11388 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC30.84■■■□□ 2.53
TOP2AP11388 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TOP2AP11388 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
TOP2AP11388 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TOP2AP11388 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
TOP2AP11388 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC30.83■■■□□ 2.53
TOP2AP11388 AC007064.4-201ENST00000637740 555 ntBASIC30.83■■■□□ 2.53
TOP2AP11388 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC30.83■■■□□ 2.53
TOP2AP11388 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
TOP2AP11388 FLYWCH1P1-201ENST00000460917 1874 ntBASIC30.83■■■□□ 2.53
TOP2AP11388 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TOP2AP11388 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TOP2AP11388 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
TOP2AP11388 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
TOP2AP11388 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC30.83■■■□□ 2.53
TOP2AP11388 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
TOP2AP11388 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
TOP2AP11388 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
TOP2AP11388 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
TOP2AP11388 PAWRP1-201ENST00000451083 565 ntBASIC30.83■■■□□ 2.53
TOP2AP11388 AC105339.1-204ENST00000636249 355 ntBASIC30.83■■■□□ 2.53
TOP2AP11388 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TOP2AP11388 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TOP2AP11388 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC30.82■■■□□ 2.52
TOP2AP11388 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TOP2AP11388 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC30.82■■■□□ 2.52
TOP2AP11388 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TOP2AP11388 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TOP2AP11388 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TOP2AP11388 AC087163.2-201ENST00000457299 853 ntBASIC30.82■■■□□ 2.52
TOP2AP11388 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TOP2AP11388 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC30.82■■■□□ 2.52
TOP2AP11388 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC30.81■■■□□ 2.52
TOP2AP11388 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TOP2AP11388 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TOP2AP11388 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC30.81■■■□□ 2.52
TOP2AP11388 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TOP2AP11388 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TOP2AP11388 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TOP2AP11388 AC109322.1-201ENST00000524499 1264 ntBASIC30.81■■■□□ 2.52
TOP2AP11388 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC30.81■■■□□ 2.52
TOP2AP11388 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC30.81■■■□□ 2.52
TOP2AP11388 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TOP2AP11388 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC30.81■■■□□ 2.52
TOP2AP11388 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC30.81■■■□□ 2.52
TOP2AP11388 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TOP2AP11388 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC30.81■■■□□ 2.52
TOP2AP11388 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TOP2AP11388 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
TOP2AP11388 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
TOP2AP11388 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC30.8■■■□□ 2.52
TOP2AP11388 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC30.8■■■□□ 2.52
TOP2AP11388 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC30.8■■■□□ 2.52
TOP2AP11388 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC30.8■■■□□ 2.52
TOP2AP11388 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TOP2AP11388 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
TOP2AP11388 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
TOP2AP11388 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TOP2AP11388 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC30.8■■■□□ 2.52
TOP2AP11388 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC30.8■■■□□ 2.52
TOP2AP11388 SYS1-203ENST00000414310 795 ntTSL 3 BASIC30.79■■■□□ 2.52
TOP2AP11388 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TOP2AP11388 SLC25A6P2-201ENST00000497974 877 ntBASIC30.79■■■□□ 2.52
TOP2AP11388 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC30.79■■■□□ 2.52
TOP2AP11388 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC30.79■■■□□ 2.52
TOP2AP11388 AC005498.2-205ENST00000593218 784 ntBASIC30.79■■■□□ 2.52
TOP2AP11388 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC30.79■■■□□ 2.52
TOP2AP11388 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TOP2AP11388 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TOP2AP11388 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TOP2AP11388 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TOP2AP11388 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TOP2AP11388 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC30.79■■■□□ 2.52
TOP2AP11388 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TOP2AP11388 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC30.79■■■□□ 2.52
TOP2AP11388 ENSA-206ENST00000361631 725 ntTSL 2 BASIC30.78■■■□□ 2.52
TOP2AP11388 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
TOP2AP11388 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC30.78■■■□□ 2.52
TOP2AP11388 AC093512.1-201ENST00000617969 520 ntBASIC30.78■■■□□ 2.52
TOP2AP11388 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
TOP2AP11388 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
TOP2AP11388 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
TOP2AP11388 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
TOP2AP11388 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC30.78■■■□□ 2.52
TOP2AP11388 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC30.78■■■□□ 2.52
TOP2AP11388 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
TOP2AP11388 FALEC-201ENST00000416894 566 ntTSL 3 BASIC30.78■■■□□ 2.52
TOP2AP11388 HLA-J-203ENST00000494367 1087 ntBASIC30.78■■■□□ 2.52
TOP2AP11388 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC30.78■■■□□ 2.52
TOP2AP11388 AC093520.2-201ENST00000561830 333 ntBASIC30.78■■■□□ 2.52
TOP2AP11388 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC30.78■■■□□ 2.52
TOP2AP11388 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
TOP2AP11388 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms