Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A2P08123 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A2P08123 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.43■□□□□ 0.7
COL1A2P08123 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A2P08123 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.43■□□□□ 0.7
COL1A2P08123 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
COL1A2P08123 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.43■□□□□ 0.7
COL1A2P08123 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
COL1A2P08123 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.43■□□□□ 0.7
COL1A2P08123 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A2P08123 AC087289.5-201ENST00000586076 3175 ntBASIC19.43■□□□□ 0.7
COL1A2P08123 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.43■□□□□ 0.7
COL1A2P08123 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COL1A2P08123 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A2P08123 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A2P08123 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A2P08123 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.43■□□□□ 0.7
COL1A2P08123 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A2P08123 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
COL1A2P08123 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.43■□□□□ 0.7
COL1A2P08123 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A2P08123 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A2P08123 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A2P08123 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A2P08123 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
COL1A2P08123 PMS2P7-201ENST00000506558 1336 ntBASIC19.43■□□□□ 0.7
COL1A2P08123 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A2P08123 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.42■□□□□ 0.7
COL1A2P08123 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A2P08123 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.42■□□□□ 0.7
COL1A2P08123 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A2P08123 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
COL1A2P08123 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A2P08123 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A2P08123 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COL1A2P08123 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.42■□□□□ 0.7
COL1A2P08123 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A2P08123 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A2P08123 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A2P08123 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
COL1A2P08123 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A2P08123 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A2P08123 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A2P08123 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.42■□□□□ 0.7
COL1A2P08123 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.42■□□□□ 0.7
COL1A2P08123 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.42■□□□□ 0.7
COL1A2P08123 AC005593.1-201ENST00000624894 515 ntBASIC19.42■□□□□ 0.7
COL1A2P08123 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
COL1A2P08123 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.42■□□□□ 0.7
COL1A2P08123 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.42■□□□□ 0.7
COL1A2P08123 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A2P08123 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COL1A2P08123 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
COL1A2P08123 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A2P08123 ABALON-201ENST00000629058 1903 ntBASIC19.41■□□□□ 0.7
COL1A2P08123 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
COL1A2P08123 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.41■□□□□ 0.7
COL1A2P08123 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A2P08123 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A2P08123 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.41■□□□□ 0.7
COL1A2P08123 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
COL1A2P08123 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.41■□□□□ 0.7
COL1A2P08123 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COL1A2P08123 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.41■□□□□ 0.7
COL1A2P08123 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.41■□□□□ 0.7
COL1A2P08123 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A2P08123 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.41■□□□□ 0.7
COL1A2P08123 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A2P08123 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.41■□□□□ 0.7
COL1A2P08123 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A2P08123 ELK2BP-201ENST00000415014 1224 ntBASIC19.41■□□□□ 0.7
COL1A2P08123 MED15P5-201ENST00000423150 992 ntBASIC19.41■□□□□ 0.7
COL1A2P08123 AC009947.1-201ENST00000444350 727 ntBASIC19.41■□□□□ 0.7
COL1A2P08123 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.41■□□□□ 0.7
COL1A2P08123 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.41■□□□□ 0.7
COL1A2P08123 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.41■□□□□ 0.7
COL1A2P08123 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.41■□□□□ 0.7
COL1A2P08123 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.41■□□□□ 0.7
COL1A2P08123 AC140113.2-201ENST00000604370 208 ntBASIC19.41■□□□□ 0.7
COL1A2P08123 BICD1-207ENST00000551848 1962 ntBASIC19.41■□□□□ 0.7
COL1A2P08123 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A2P08123 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A2P08123 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A2P08123 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.41■□□□□ 0.7
COL1A2P08123 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A2P08123 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.4■□□□□ 0.7
COL1A2P08123 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A2P08123 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A2P08123 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A2P08123 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A2P08123 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A2P08123 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A2P08123 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
COL1A2P08123 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A2P08123 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A2P08123 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A2P08123 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.4■□□□□ 0.7
COL1A2P08123 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.4■□□□□ 0.7
COL1A2P08123 AL139424.1-201ENST00000607572 797 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms