Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 SPDYE15P-201ENST00000424157 909 ntBASIC15.81■□□□□ 0.12
ERCC1P07992 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ERCC1P07992 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC1P07992 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.81■□□□□ 0.12
ERCC1P07992 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC1P07992 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.81■□□□□ 0.12
ERCC1P07992 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.81■□□□□ 0.12
ERCC1P07992 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC1P07992 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC1P07992 HOXB1-202ENST00000577092 1414 ntBASIC15.81■□□□□ 0.12
ERCC1P07992 AC005332.1-201ENST00000577698 1310 ntBASIC15.81■□□□□ 0.12
ERCC1P07992 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC1P07992 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ERCC1P07992 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.81■□□□□ 0.12
ERCC1P07992 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC1P07992 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ERCC1P07992 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC1P07992 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.81■□□□□ 0.12
ERCC1P07992 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ERCC1P07992 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ERCC1P07992 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.8■□□□□ 0.12
ERCC1P07992 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.8■□□□□ 0.12
ERCC1P07992 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.8■□□□□ 0.12
ERCC1P07992 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ERCC1P07992 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.8■□□□□ 0.12
ERCC1P07992 AL645929.1-201ENST00000420084 975 ntBASIC15.8■□□□□ 0.12
ERCC1P07992 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.8■□□□□ 0.12
ERCC1P07992 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.8■□□□□ 0.12
ERCC1P07992 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.8■□□□□ 0.12
ERCC1P07992 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.8■□□□□ 0.12
ERCC1P07992 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.8■□□□□ 0.12
ERCC1P07992 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.8■□□□□ 0.12
ERCC1P07992 AC093458.2-201ENST00000623150 629 ntBASIC15.8■□□□□ 0.12
ERCC1P07992 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.8■□□□□ 0.12
ERCC1P07992 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.8■□□□□ 0.12
ERCC1P07992 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ERCC1P07992 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ERCC1P07992 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.8■□□□□ 0.12
ERCC1P07992 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ERCC1P07992 SIRPAP1-201ENST00000448467 1770 ntBASIC15.8■□□□□ 0.12
ERCC1P07992 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC1P07992 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.79■□□□□ 0.12
ERCC1P07992 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 AL163051.1-201ENST00000569214 1512 ntBASIC15.79■□□□□ 0.12
ERCC1P07992 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.79■□□□□ 0.12
ERCC1P07992 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
ERCC1P07992 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.79■□□□□ 0.12
ERCC1P07992 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.79■□□□□ 0.12
ERCC1P07992 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 MIR3917-201ENST00000580971 93 ntBASIC15.79■□□□□ 0.12
ERCC1P07992 MIR3180-4-201ENST00000582223 153 ntBASIC15.79■□□□□ 0.12
ERCC1P07992 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.79■□□□□ 0.12
ERCC1P07992 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ERCC1P07992 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.79■□□□□ 0.12
ERCC1P07992 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ERCC1P07992 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
ERCC1P07992 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.79■□□□□ 0.12
ERCC1P07992 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ERCC1P07992 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC1P07992 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ERCC1P07992 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
ERCC1P07992 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.78■□□□□ 0.12
ERCC1P07992 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.78■□□□□ 0.12
ERCC1P07992 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms