Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
HMGN1P05114 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN1P05114 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.15■□□□□ 0.18
HMGN1P05114 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.14■□□□□ 0.18
HMGN1P05114 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.14■□□□□ 0.18
HMGN1P05114 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
HMGN1P05114 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.14■□□□□ 0.18
HMGN1P05114 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGN1P05114 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HMGN1P05114 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMGN1P05114 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGN1P05114 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGN1P05114 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGN1P05114 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGN1P05114 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGN1P05114 LINC00167-201ENST00000530583 1419 ntBASIC16.14■□□□□ 0.17
HMGN1P05114 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGN1P05114 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGN1P05114 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.14■□□□□ 0.17
HMGN1P05114 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGN1P05114 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.14■□□□□ 0.17
HMGN1P05114 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
HMGN1P05114 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.14■□□□□ 0.17
HMGN1P05114 FITM1-202ENST00000559294 800 ntBASIC16.14■□□□□ 0.17
HMGN1P05114 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.14■□□□□ 0.17
HMGN1P05114 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMGN1P05114 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.14■□□□□ 0.17
HMGN1P05114 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.14■□□□□ 0.17
HMGN1P05114 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMGN1P05114 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGN1P05114 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGN1P05114 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGN1P05114 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGN1P05114 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.13■□□□□ 0.17
HMGN1P05114 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGN1P05114 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HMGN1P05114 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGN1P05114 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGN1P05114 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.13■□□□□ 0.17
HMGN1P05114 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.13■□□□□ 0.17
HMGN1P05114 AL158047.1-201ENST00000445918 881 ntBASIC16.13■□□□□ 0.17
HMGN1P05114 SEC1P-202ENST00000473944 940 ntBASIC16.13■□□□□ 0.17
HMGN1P05114 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.13■□□□□ 0.17
HMGN1P05114 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.13■□□□□ 0.17
HMGN1P05114 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
HMGN1P05114 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HMGN1P05114 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.13■□□□□ 0.17
HMGN1P05114 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGN1P05114 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HMGN1P05114 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGN1P05114 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HMGN1P05114 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
HMGN1P05114 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGN1P05114 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGN1P05114 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGN1P05114 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGN1P05114 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.13■□□□□ 0.17
HMGN1P05114 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGN1P05114 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HMGN1P05114 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGN1P05114 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGN1P05114 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.12■□□□□ 0.17
HMGN1P05114 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HMGN1P05114 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HMGN1P05114 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
HMGN1P05114 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.12■□□□□ 0.17
HMGN1P05114 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.12■□□□□ 0.17
HMGN1P05114 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HMGN1P05114 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.12■□□□□ 0.17
HMGN1P05114 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 PRORSD1P-201ENST00000295112 541 ntBASIC16.12■□□□□ 0.17
HMGN1P05114 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 DDX43P3-201ENST00000441064 443 ntBASIC16.12■□□□□ 0.17
HMGN1P05114 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HMGN1P05114 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.12■□□□□ 0.17
HMGN1P05114 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.12■□□□□ 0.17
HMGN1P05114 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.12■□□□□ 0.17
HMGN1P05114 AC092865.7-201ENST00000641832 219 ntBASIC16.12■□□□□ 0.17
HMGN1P05114 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HMGN1P05114 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms