Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
TCRAP04437 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TCRAP04437 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
TCRAP04437 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.56□□□□□ -0.24
TCRAP04437 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.56□□□□□ -0.24
TCRAP04437 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRAP04437 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.56□□□□□ -0.24
TCRAP04437 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.56□□□□□ -0.24
TCRAP04437 WWOX-216ENST00000569818 525 ntBASIC13.56□□□□□ -0.24
TCRAP04437 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.56□□□□□ -0.24
TCRAP04437 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.56□□□□□ -0.24
TCRAP04437 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TCRAP04437 AC006058.3-201ENST00000606217 1069 ntBASIC13.56□□□□□ -0.24
TCRAP04437 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRAP04437 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRAP04437 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRAP04437 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 AC106886.4-201ENST00000623557 2502 ntBASIC13.56□□□□□ -0.24
TCRAP04437 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TCRAP04437 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TCRAP04437 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 AC018695.7-201ENST00000624587 2492 ntBASIC13.55□□□□□ -0.24
TCRAP04437 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRAP04437 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRAP04437 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.55□□□□□ -0.24
TCRAP04437 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.55□□□□□ -0.24
TCRAP04437 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRAP04437 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRAP04437 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRAP04437 AC116562.2-201ENST00000507042 360 ntBASIC13.55□□□□□ -0.24
TCRAP04437 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.55□□□□□ -0.24
TCRAP04437 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.55□□□□□ -0.24
TCRAP04437 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TCRAP04437 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRAP04437 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 CR769767.2-201ENST00000622735 460 ntBASIC13.55□□□□□ -0.24
TCRAP04437 AC112497.1-201ENST00000624824 639 ntBASIC13.55□□□□□ -0.24
TCRAP04437 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.55□□□□□ -0.24
TCRAP04437 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TCRAP04437 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TCRAP04437 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TCRAP04437 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TCRAP04437 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.55□□□□□ -0.24
TCRAP04437 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRAP04437 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.54□□□□□ -0.24
TCRAP04437 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRAP04437 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TCRAP04437 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRAP04437 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRAP04437 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.54□□□□□ -0.24
TCRAP04437 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TCRAP04437 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRAP04437 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TCRAP04437 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRAP04437 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TCRAP04437 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.54□□□□□ -0.24
TCRAP04437 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TCRAP04437 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.54□□□□□ -0.24
TCRAP04437 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.54□□□□□ -0.24
TCRAP04437 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.54□□□□□ -0.24
TCRAP04437 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.54□□□□□ -0.24
TCRAP04437 AC008687.5-201ENST00000593746 558 ntBASIC13.54□□□□□ -0.24
TCRAP04437 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
TCRAP04437 CD177P1-201ENST00000606252 935 ntBASIC13.54□□□□□ -0.24
TCRAP04437 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.54□□□□□ -0.24
TCRAP04437 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.54□□□□□ -0.24
TCRAP04437 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TCRAP04437 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.54□□□□□ -0.24
TCRAP04437 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRAP04437 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRAP04437 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TCRAP04437 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms