Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.26■□□□□ 0.67
CHRNA1P02708 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.26■□□□□ 0.67
CHRNA1P02708 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRNA1P02708 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA1P02708 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRNA1P02708 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.26■□□□□ 0.67
CHRNA1P02708 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA1P02708 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA1P02708 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA1P02708 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA1P02708 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA1P02708 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHRNA1P02708 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA1P02708 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA1P02708 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHRNA1P02708 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNA1P02708 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA1P02708 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA1P02708 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CHRNA1P02708 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.25■□□□□ 0.67
CHRNA1P02708 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA1P02708 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA1P02708 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA1P02708 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA1P02708 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNA1P02708 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.25■□□□□ 0.67
CHRNA1P02708 AC108073.2-201ENST00000464002 357 ntBASIC19.25■□□□□ 0.67
CHRNA1P02708 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA1P02708 RPS15P9-201ENST00000494093 319 ntBASIC19.25■□□□□ 0.67
CHRNA1P02708 IGHV3-65-201ENST00000523210 341 ntBASIC19.25■□□□□ 0.67
CHRNA1P02708 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNA1P02708 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.25■□□□□ 0.67
CHRNA1P02708 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
CHRNA1P02708 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.25■□□□□ 0.67
CHRNA1P02708 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNA1P02708 STK25P1-201ENST00000585406 838 ntBASIC19.25■□□□□ 0.67
CHRNA1P02708 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA1P02708 AC008667.4-201ENST00000607370 168 ntBASIC19.25■□□□□ 0.67
CHRNA1P02708 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA1P02708 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA1P02708 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA1P02708 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNA1P02708 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA1P02708 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CHRNA1P02708 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHRNA1P02708 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CHRNA1P02708 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA1P02708 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNA1P02708 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CHRNA1P02708 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHRNA1P02708 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA1P02708 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHRNA1P02708 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
CHRNA1P02708 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHRNA1P02708 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNA1P02708 CRYGEP-201ENST00000412192 528 ntBASIC19.24■□□□□ 0.67
CHRNA1P02708 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.24■□□□□ 0.67
CHRNA1P02708 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.24■□□□□ 0.67
CHRNA1P02708 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.24■□□□□ 0.67
CHRNA1P02708 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNA1P02708 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA1P02708 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.24■□□□□ 0.67
CHRNA1P02708 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNA1P02708 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 AC116407.2-201ENST00000613639 860 ntBASIC19.24■□□□□ 0.67
CHRNA1P02708 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA1P02708 AC092865.6-201ENST00000642101 219 ntBASIC19.24■□□□□ 0.67
CHRNA1P02708 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHRNA1P02708 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNA1P02708 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA1P02708 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHRNA1P02708 AC093503.3-201ENST00000624917 2352 ntBASIC19.24■□□□□ 0.67
CHRNA1P02708 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNA1P02708 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRNA1P02708 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNA1P02708 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CHRNA1P02708 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA1P02708 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA1P02708 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA1P02708 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA1P02708 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.23■□□□□ 0.67
CHRNA1P02708 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA1P02708 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.23■□□□□ 0.67
CHRNA1P02708 MCCD1P2-201ENST00000423228 335 ntBASIC19.23■□□□□ 0.67
CHRNA1P02708 VN2R19P-201ENST00000442399 1052 ntBASIC19.23■□□□□ 0.67
CHRNA1P02708 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRNA1P02708 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA1P02708 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms