Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CPNE6O95741 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE6O95741 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CPNE6O95741 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE6O95741 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE6O95741 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 AC126763.1-201ENST00000552015 2118 ntBASIC17.47■□□□□ 0.39
CPNE6O95741 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE6O95741 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE6O95741 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.47■□□□□ 0.39
CPNE6O95741 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE6O95741 AC096582.2-201ENST00000510860 516 ntBASIC17.47■□□□□ 0.39
CPNE6O95741 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.47■□□□□ 0.39
CPNE6O95741 AC064862.7-201ENST00000604520 867 ntBASIC17.47■□□□□ 0.39
CPNE6O95741 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE6O95741 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CPNE6O95741 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CPNE6O95741 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CPNE6O95741 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE6O95741 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPNE6O95741 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CPNE6O95741 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPNE6O95741 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CPNE6O95741 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.46■□□□□ 0.39
CPNE6O95741 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE6O95741 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.46■□□□□ 0.39
CPNE6O95741 AF238378.1-201ENST00000526806 358 ntBASIC17.46■□□□□ 0.39
CPNE6O95741 MIR5100-201ENST00000579544 119 ntBASIC17.46■□□□□ 0.39
CPNE6O95741 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.46■□□□□ 0.39
CPNE6O95741 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE6O95741 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 AC114341.1-201ENST00000618070 349 ntBASIC17.46■□□□□ 0.39
CPNE6O95741 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE6O95741 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CPNE6O95741 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE6O95741 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPNE6O95741 AC141586.5-201ENST00000624546 2050 ntBASIC17.46■□□□□ 0.39
CPNE6O95741 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CPNE6O95741 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE6O95741 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CPNE6O95741 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE6O95741 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CPNE6O95741 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE6O95741 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE6O95741 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.45■□□□□ 0.38
CPNE6O95741 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE6O95741 MRPL3P1-201ENST00000400109 1033 ntBASIC17.45■□□□□ 0.38
CPNE6O95741 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE6O95741 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CPNE6O95741 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.45■□□□□ 0.38
CPNE6O95741 AP000347.1-202ENST00000435868 847 ntBASIC17.45■□□□□ 0.38
CPNE6O95741 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms