Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
VAPBO95292 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.9■□□□□ 0.46
VAPBO95292 AC106820.2-201ENST00000563775 3264 ntBASIC17.9■□□□□ 0.46
VAPBO95292 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.9■□□□□ 0.46
VAPBO95292 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
VAPBO95292 LINC01311-201ENST00000565162 1445 ntBASIC17.89■□□□□ 0.46
VAPBO95292 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.89■□□□□ 0.46
VAPBO95292 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VAPBO95292 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VAPBO95292 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.89■□□□□ 0.46
VAPBO95292 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VAPBO95292 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.89■□□□□ 0.45
VAPBO95292 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 PKD1P1-201ENST00000458669 6805 ntBASIC17.89■□□□□ 0.45
VAPBO95292 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
VAPBO95292 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.89■□□□□ 0.45
VAPBO95292 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.89■□□□□ 0.45
VAPBO95292 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.89■□□□□ 0.45
VAPBO95292 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.89■□□□□ 0.45
VAPBO95292 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.89■□□□□ 0.45
VAPBO95292 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.89■□□□□ 0.45
VAPBO95292 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.89■□□□□ 0.45
VAPBO95292 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.89■□□□□ 0.45
VAPBO95292 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VAPBO95292 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.89■□□□□ 0.45
VAPBO95292 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.89■□□□□ 0.45
VAPBO95292 AL353692.3-201ENST00000407031 1396 ntBASIC17.89■□□□□ 0.45
VAPBO95292 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 AC141586.5-201ENST00000624546 2050 ntBASIC17.89■□□□□ 0.45
VAPBO95292 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
VAPBO95292 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.89■□□□□ 0.45
VAPBO95292 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAPBO95292 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.88■□□□□ 0.45
VAPBO95292 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.88■□□□□ 0.45
VAPBO95292 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VAPBO95292 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VAPBO95292 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VAPBO95292 AC133963.1-201ENST00000504166 1679 ntBASIC17.88■□□□□ 0.45
VAPBO95292 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 RCN1P1-201ENST00000400413 996 ntBASIC17.88■□□□□ 0.45
VAPBO95292 AC063952.2-201ENST00000498792 1227 ntBASIC17.88■□□□□ 0.45
VAPBO95292 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
VAPBO95292 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.88■□□□□ 0.45
VAPBO95292 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.88■□□□□ 0.45
VAPBO95292 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.88■□□□□ 0.45
VAPBO95292 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 RN7SL850P-201ENST00000579959 291 ntBASIC17.88■□□□□ 0.45
VAPBO95292 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.88■□□□□ 0.45
VAPBO95292 GPR32P1-201ENST00000601788 811 ntBASIC17.88■□□□□ 0.45
VAPBO95292 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.88■□□□□ 0.45
VAPBO95292 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.88■□□□□ 0.45
VAPBO95292 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VAPBO95292 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
VAPBO95292 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPBO95292 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.88■□□□□ 0.45
VAPBO95292 AL645608.8-201ENST00000606034 2086 ntBASIC17.87■□□□□ 0.45
VAPBO95292 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.87■□□□□ 0.45
VAPBO95292 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.87■□□□□ 0.45
VAPBO95292 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VAPBO95292 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.87■□□□□ 0.45
VAPBO95292 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.87■□□□□ 0.45
VAPBO95292 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.87■□□□□ 0.45
VAPBO95292 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VAPBO95292 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.87■□□□□ 0.45
VAPBO95292 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms