Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 AC007950.2-201ENST00000615045 2347 ntBASIC16.2■□□□□ 0.18
CLPXO76031 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CLPXO76031 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CLPXO76031 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.2■□□□□ 0.18
CLPXO76031 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CLPXO76031 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.2■□□□□ 0.18
CLPXO76031 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.2■□□□□ 0.18
CLPXO76031 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.19■□□□□ 0.18
CLPXO76031 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
CLPXO76031 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLPXO76031 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.19■□□□□ 0.18
CLPXO76031 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CLPXO76031 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.19■□□□□ 0.18
CLPXO76031 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.19■□□□□ 0.18
CLPXO76031 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.19■□□□□ 0.18
CLPXO76031 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
CLPXO76031 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CLPXO76031 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.19■□□□□ 0.18
CLPXO76031 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.19■□□□□ 0.18
CLPXO76031 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 YBX1P10-201ENST00000444752 975 ntBASIC16.19■□□□□ 0.18
CLPXO76031 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.19■□□□□ 0.18
CLPXO76031 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.19■□□□□ 0.18
CLPXO76031 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLPXO76031 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.19■□□□□ 0.18
CLPXO76031 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLPXO76031 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.18■□□□□ 0.18
CLPXO76031 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.18■□□□□ 0.18
CLPXO76031 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CLPXO76031 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 GMCL1P1-201ENST00000463439 1581 ntBASIC16.18■□□□□ 0.18
CLPXO76031 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CLPXO76031 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.18■□□□□ 0.18
CLPXO76031 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CLPXO76031 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.18■□□□□ 0.18
CLPXO76031 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.18■□□□□ 0.18
CLPXO76031 RPPH1-201ENST00000516869 333 ntBASIC16.18■□□□□ 0.18
CLPXO76031 PRKY-204ENST00000533551 1019 ntBASIC16.18■□□□□ 0.18
CLPXO76031 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.18■□□□□ 0.18
CLPXO76031 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.18■□□□□ 0.18
CLPXO76031 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.18■□□□□ 0.18
CLPXO76031 AC069544.1-201ENST00000609399 999 ntBASIC16.18■□□□□ 0.18
CLPXO76031 FAM197Y4-202ENST00000622692 608 ntBASIC16.18■□□□□ 0.18
CLPXO76031 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CLPXO76031 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLPXO76031 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLPXO76031 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CLPXO76031 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.18■□□□□ 0.18
CLPXO76031 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.18■□□□□ 0.18
CLPXO76031 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPXO76031 AC022188.1-201ENST00000620960 1664 ntBASIC16.18■□□□□ 0.18
CLPXO76031 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLPXO76031 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.17■□□□□ 0.18
CLPXO76031 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLPXO76031 KRT8P32-201ENST00000512863 1461 ntBASIC16.17■□□□□ 0.18
CLPXO76031 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms