Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT33AO76009 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT33AO76009 SLC25A6P5-201ENST00000435663 894 ntBASIC16.17■□□□□ 0.18
KRT33AO76009 AC092597.1-201ENST00000487352 616 ntBASIC16.17■□□□□ 0.18
KRT33AO76009 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.17■□□□□ 0.18
KRT33AO76009 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.17■□□□□ 0.18
KRT33AO76009 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.17■□□□□ 0.18
KRT33AO76009 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT33AO76009 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT33AO76009 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT33AO76009 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT33AO76009 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT33AO76009 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT33AO76009 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT33AO76009 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
KRT33AO76009 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT33AO76009 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT33AO76009 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT33AO76009 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT33AO76009 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT33AO76009 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT33AO76009 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.17■□□□□ 0.18
KRT33AO76009 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
KRT33AO76009 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT33AO76009 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
KRT33AO76009 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
KRT33AO76009 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT33AO76009 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT33AO76009 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT33AO76009 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT33AO76009 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KRT33AO76009 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT33AO76009 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.16■□□□□ 0.18
KRT33AO76009 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.16■□□□□ 0.18
KRT33AO76009 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.16■□□□□ 0.18
KRT33AO76009 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT33AO76009 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT33AO76009 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KRT33AO76009 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KRT33AO76009 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT33AO76009 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT33AO76009 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
KRT33AO76009 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KRT33AO76009 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 AC099398.1-201ENST00000567919 2776 ntBASIC16.15■□□□□ 0.18
KRT33AO76009 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT33AO76009 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT33AO76009 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.15■□□□□ 0.18
KRT33AO76009 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
KRT33AO76009 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT33AO76009 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KRT33AO76009 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT33AO76009 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT33AO76009 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT33AO76009 KRT18P48-201ENST00000434763 852 ntBASIC16.15■□□□□ 0.18
KRT33AO76009 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.15■□□□□ 0.18
KRT33AO76009 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.15■□□□□ 0.18
KRT33AO76009 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT33AO76009 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.15■□□□□ 0.18
KRT33AO76009 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
KRT33AO76009 AC024563.2-201ENST00000603282 481 ntBASIC16.15■□□□□ 0.18
KRT33AO76009 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT33AO76009 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
KRT33AO76009 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
KRT33AO76009 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms