Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PRAMEF4O60810 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRAMEF4O60810 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
PRAMEF4O60810 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PRAMEF4O60810 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.1■□□□□ 0.33
PRAMEF4O60810 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 PCED1CP-201ENST00000419887 785 ntBASIC17.1■□□□□ 0.33
PRAMEF4O60810 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 KRT18P35-201ENST00000510488 1269 ntBASIC17.1■□□□□ 0.33
PRAMEF4O60810 GUSBP12-201ENST00000513727 720 ntBASIC17.1■□□□□ 0.33
PRAMEF4O60810 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
PRAMEF4O60810 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.1■□□□□ 0.33
PRAMEF4O60810 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRAMEF4O60810 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.1■□□□□ 0.33
PRAMEF4O60810 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PRAMEF4O60810 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF4O60810 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF4O60810 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF4O60810 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 AP002383.4-201ENST00000442518 975 ntBASIC17.09■□□□□ 0.33
PRAMEF4O60810 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 AC087388.1-201ENST00000571370 1112 ntBASIC17.09■□□□□ 0.33
PRAMEF4O60810 AP005901.3-202ENST00000581653 237 ntBASIC17.09■□□□□ 0.33
PRAMEF4O60810 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 LINC01451-201ENST00000623792 534 ntBASIC17.09■□□□□ 0.33
PRAMEF4O60810 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF4O60810 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF4O60810 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PRAMEF4O60810 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.08■□□□□ 0.33
PRAMEF4O60810 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF4O60810 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF4O60810 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF4O60810 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
PRAMEF4O60810 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF4O60810 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF4O60810 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF4O60810 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF4O60810 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 AL138688.1-201ENST00000624851 1594 ntBASIC17.08■□□□□ 0.32
PRAMEF4O60810 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 AC125634.1-201ENST00000438758 1403 ntBASIC17.08■□□□□ 0.32
PRAMEF4O60810 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 AC097374.2-201ENST00000618617 1306 ntBASIC17.08■□□□□ 0.32
PRAMEF4O60810 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF4O60810 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 AC005104.2-201ENST00000427818 678 ntBASIC17.08■□□□□ 0.32
PRAMEF4O60810 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF4O60810 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.08■□□□□ 0.32
PRAMEF4O60810 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms