Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
GMDSO60547 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
GMDSO60547 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 ECEL1P3-201ENST00000427961 737 ntBASIC15.79■□□□□ 0.12
GMDSO60547 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.79■□□□□ 0.12
GMDSO60547 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.79■□□□□ 0.12
GMDSO60547 MIR3180-4-201ENST00000582223 153 ntBASIC15.79■□□□□ 0.12
GMDSO60547 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.79■□□□□ 0.12
GMDSO60547 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 AC005363.2-201ENST00000618631 242 ntBASIC15.79■□□□□ 0.12
GMDSO60547 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
GMDSO60547 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.79■□□□□ 0.12
GMDSO60547 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
GMDSO60547 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.79■□□□□ 0.12
GMDSO60547 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.79■□□□□ 0.12
GMDSO60547 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.79■□□□□ 0.12
GMDSO60547 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
GMDSO60547 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.79■□□□□ 0.12
GMDSO60547 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.79■□□□□ 0.12
GMDSO60547 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GMDSO60547 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.79■□□□□ 0.12
GMDSO60547 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.79■□□□□ 0.12
GMDSO60547 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GMDSO60547 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 AC009102.3-201ENST00000623118 1491 ntBASIC15.78■□□□□ 0.12
GMDSO60547 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.78■□□□□ 0.12
GMDSO60547 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.78■□□□□ 0.12
GMDSO60547 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
GMDSO60547 MIR149-201ENST00000384879 89 ntBASIC15.78■□□□□ 0.12
GMDSO60547 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 AC009947.2-201ENST00000444014 672 ntBASIC15.78■□□□□ 0.12
GMDSO60547 ATP5G1P1-201ENST00000448724 379 ntBASIC15.78■□□□□ 0.12
GMDSO60547 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.78■□□□□ 0.12
GMDSO60547 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.78■□□□□ 0.12
GMDSO60547 AC104390.1-201ENST00000555663 520 ntBASIC15.78■□□□□ 0.12
GMDSO60547 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.78■□□□□ 0.12
GMDSO60547 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.78■□□□□ 0.12
GMDSO60547 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
GMDSO60547 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 LINC01126-201ENST00000623515 1646 ntBASIC15.78■□□□□ 0.12
GMDSO60547 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.78■□□□□ 0.12
GMDSO60547 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.78■□□□□ 0.12
GMDSO60547 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
GMDSO60547 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GMDSO60547 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.78■□□□□ 0.12
GMDSO60547 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.78■□□□□ 0.12
GMDSO60547 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.77■□□□□ 0.12
GMDSO60547 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 AL596257.1-201ENST00000641463 2694 ntBASIC15.77■□□□□ 0.12
GMDSO60547 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.77■□□□□ 0.12
GMDSO60547 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.77■□□□□ 0.12
GMDSO60547 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 AC211429.1-201ENST00000415277 523 ntBASIC15.77■□□□□ 0.12
GMDSO60547 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GMDSO60547 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.77■□□□□ 0.12
GMDSO60547 AC141257.4-201ENST00000634557 245 ntBASIC15.77■□□□□ 0.12
GMDSO60547 AC136944.6-201ENST00000634818 245 ntBASIC15.77■□□□□ 0.12
GMDSO60547 AL031432.5-201ENST00000641059 760 ntBASIC15.77■□□□□ 0.12
GMDSO60547 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
GMDSO60547 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.77■□□□□ 0.11
GMDSO60547 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
GMDSO60547 AP001094.4-201ENST00000579008 2176 ntBASIC15.77■□□□□ 0.11
GMDSO60547 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
GMDSO60547 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.77■□□□□ 0.11
GMDSO60547 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
GMDSO60547 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GMDSO60547 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms