Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 GPR32P1-201ENST00000601788 811 ntBASIC17.02■□□□□ 0.32
PCDH7O60245 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH7O60245 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH7O60245 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDH7O60245 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH7O60245 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
PCDH7O60245 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
PCDH7O60245 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH7O60245 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH7O60245 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.02■□□□□ 0.31
PCDH7O60245 AL353692.3-201ENST00000407031 1396 ntBASIC17.02■□□□□ 0.31
PCDH7O60245 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PCDH7O60245 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH7O60245 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH7O60245 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDH7O60245 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH7O60245 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH7O60245 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDH7O60245 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
PCDH7O60245 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDH7O60245 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
PCDH7O60245 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH7O60245 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH7O60245 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDH7O60245 AC104076.2-201ENST00000448912 469 ntBASIC17.01■□□□□ 0.31
PCDH7O60245 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDH7O60245 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDH7O60245 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH7O60245 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 HYMAI.1-201ENST00000620949 238 ntBASIC17.01■□□□□ 0.31
PCDH7O60245 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PCDH7O60245 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH7O60245 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH7O60245 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17■□□□□ 0.31
PCDH7O60245 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17■□□□□ 0.31
PCDH7O60245 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17■□□□□ 0.31
PCDH7O60245 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
PCDH7O60245 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 PP12613-201ENST00000424958 2230 ntBASIC17■□□□□ 0.31
PCDH7O60245 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PCDH7O60245 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17■□□□□ 0.31
PCDH7O60245 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDH7O60245 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDH7O60245 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17■□□□□ 0.31
PCDH7O60245 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 DDX43P3-201ENST00000441064 443 ntBASIC17■□□□□ 0.31
PCDH7O60245 AC063952.2-201ENST00000498792 1227 ntBASIC17■□□□□ 0.31
PCDH7O60245 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 AC112698.1-201ENST00000510299 916 ntBASIC17■□□□□ 0.31
PCDH7O60245 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
PCDH7O60245 LINC00304-203ENST00000565008 1864 ntBASIC17■□□□□ 0.31
PCDH7O60245 RN7SL850P-201ENST00000579959 291 ntBASIC17■□□□□ 0.31
PCDH7O60245 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17■□□□□ 0.31
PCDH7O60245 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17■□□□□ 0.31
PCDH7O60245 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 CEP83-AS1-201ENST00000623122 2482 ntBASIC17■□□□□ 0.31
PCDH7O60245 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17■□□□□ 0.31
PCDH7O60245 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17■□□□□ 0.31
PCDH7O60245 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17■□□□□ 0.31
PCDH7O60245 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH7O60245 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PCDH7O60245 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDH7O60245 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH7O60245 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDH7O60245 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms