Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC046158.3-201ENST00000624947 2558 ntBASIC14.54□□□□□ -0.08
SSSCA1O60232 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SSSCA1O60232 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SSSCA1O60232 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.54□□□□□ -0.08
SSSCA1O60232 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.54□□□□□ -0.08
SSSCA1O60232 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.54□□□□□ -0.08
SSSCA1O60232 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.54□□□□□ -0.08
SSSCA1O60232 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.54□□□□□ -0.08
SSSCA1O60232 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.54□□□□□ -0.08
SSSCA1O60232 AL353708.3-201ENST00000610272 989 ntBASIC14.54□□□□□ -0.08
SSSCA1O60232 CR392000.1-201ENST00000624770 1228 ntBASIC14.54□□□□□ -0.08
SSSCA1O60232 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SSSCA1O60232 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.54□□□□□ -0.08
SSSCA1O60232 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SSSCA1O60232 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SSSCA1O60232 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.54□□□□□ -0.08
SSSCA1O60232 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.54□□□□□ -0.08
SSSCA1O60232 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SSSCA1O60232 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
SSSCA1O60232 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.54□□□□□ -0.08
SSSCA1O60232 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SSSCA1O60232 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.54□□□□□ -0.08
SSSCA1O60232 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 PCDH8P1-201ENST00000428983 2773 ntBASIC14.53□□□□□ -0.08
SSSCA1O60232 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.53□□□□□ -0.08
SSSCA1O60232 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SSSCA1O60232 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SSSCA1O60232 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.53□□□□□ -0.08
SSSCA1O60232 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SSSCA1O60232 HLA-J-201ENST00000462773 1622 ntBASIC14.53□□□□□ -0.08
SSSCA1O60232 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.53□□□□□ -0.08
SSSCA1O60232 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SSSCA1O60232 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.53□□□□□ -0.08
SSSCA1O60232 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.53□□□□□ -0.08
SSSCA1O60232 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.53□□□□□ -0.08
SSSCA1O60232 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SSSCA1O60232 AC130371.2-201ENST00000619443 611 ntBASIC14.53□□□□□ -0.08
SSSCA1O60232 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.53□□□□□ -0.08
SSSCA1O60232 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SSSCA1O60232 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSSCA1O60232 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.53□□□□□ -0.08
SSSCA1O60232 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.53□□□□□ -0.08
SSSCA1O60232 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.52□□□□□ -0.08
SSSCA1O60232 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.52□□□□□ -0.08
SSSCA1O60232 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSSCA1O60232 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.52□□□□□ -0.08
SSSCA1O60232 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SSSCA1O60232 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.52□□□□□ -0.08
SSSCA1O60232 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SSSCA1O60232 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSSCA1O60232 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SSSCA1O60232 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.52□□□□□ -0.08
SSSCA1O60232 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSSCA1O60232 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
SSSCA1O60232 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSSCA1O60232 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.52□□□□□ -0.08
SSSCA1O60232 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SSSCA1O60232 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SSSCA1O60232 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SSSCA1O60232 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSSCA1O60232 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SSSCA1O60232 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSSCA1O60232 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSSCA1O60232 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms