Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.29■□□□□ 0.04
SSX5O60225 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.29■□□□□ 0.04
SSX5O60225 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSX5O60225 AC073648.6-201ENST00000641589 218 ntBASIC15.29■□□□□ 0.04
SSX5O60225 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.29■□□□□ 0.04
SSX5O60225 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSX5O60225 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.29■□□□□ 0.04
SSX5O60225 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSX5O60225 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.29■□□□□ 0.04
SSX5O60225 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSX5O60225 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSX5O60225 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSX5O60225 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SSX5O60225 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.29■□□□□ 0.04
SSX5O60225 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSX5O60225 AL024508.2-201ENST00000607749 1894 ntBASIC15.29■□□□□ 0.04
SSX5O60225 CROCCP2-202ENST00000412962 2773 ntBASIC15.29■□□□□ 0.04
SSX5O60225 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SSX5O60225 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SSX5O60225 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSX5O60225 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.29■□□□□ 0.04
SSX5O60225 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSX5O60225 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.28■□□□□ 0.04
SSX5O60225 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SSX5O60225 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SSX5O60225 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.28■□□□□ 0.04
SSX5O60225 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
SSX5O60225 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SSX5O60225 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.28■□□□□ 0.04
SSX5O60225 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.28■□□□□ 0.04
SSX5O60225 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.28■□□□□ 0.04
SSX5O60225 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.28■□□□□ 0.04
SSX5O60225 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SSX5O60225 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SSX5O60225 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.28■□□□□ 0.04
SSX5O60225 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.28■□□□□ 0.04
SSX5O60225 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.28■□□□□ 0.04
SSX5O60225 AC133963.1-201ENST00000504166 1679 ntBASIC15.28■□□□□ 0.04
SSX5O60225 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSX5O60225 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.28■□□□□ 0.04
SSX5O60225 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.27■□□□□ 0.04
SSX5O60225 AC100803.2-201ENST00000562459 1963 ntBASIC15.27■□□□□ 0.04
SSX5O60225 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSX5O60225 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSX5O60225 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.27■□□□□ 0.04
SSX5O60225 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
SSX5O60225 HOXB1-202ENST00000577092 1414 ntBASIC15.27■□□□□ 0.04
SSX5O60225 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SSX5O60225 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSX5O60225 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SSX5O60225 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSX5O60225 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.27■□□□□ 0.04
SSX5O60225 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSX5O60225 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSX5O60225 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SSX5O60225 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSX5O60225 MFAP1P1-201ENST00000442257 1255 ntBASIC15.27■□□□□ 0.04
SSX5O60225 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSX5O60225 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.27■□□□□ 0.04
SSX5O60225 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.27■□□□□ 0.04
SSX5O60225 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.27■□□□□ 0.04
SSX5O60225 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.27■□□□□ 0.04
SSX5O60225 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSX5O60225 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSX5O60225 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSX5O60225 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.27■□□□□ 0.03
SSX5O60225 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSX5O60225 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSX5O60225 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.27■□□□□ 0.03
SSX5O60225 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.27■□□□□ 0.03
SSX5O60225 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSX5O60225 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SSX5O60225 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SSX5O60225 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SSX5O60225 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSX5O60225 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms