Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE3O43900 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE3O43900 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 BX276092.7-203ENST00000637198 1536 ntBASIC17.07■□□□□ 0.32
PRICKLE3O43900 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 AC091304.2-201ENST00000564639 760 ntBASIC17.07■□□□□ 0.32
PRICKLE3O43900 AL591684.3-201ENST00000605187 298 ntBASIC17.07■□□□□ 0.32
PRICKLE3O43900 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.07■□□□□ 0.32
PRICKLE3O43900 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE3O43900 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.06■□□□□ 0.32
PRICKLE3O43900 REXO1L11P-201ENST00000620964 1927 ntBASIC17.06■□□□□ 0.32
PRICKLE3O43900 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.06■□□□□ 0.32
PRICKLE3O43900 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.06■□□□□ 0.32
PRICKLE3O43900 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.06■□□□□ 0.32
PRICKLE3O43900 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.06■□□□□ 0.32
PRICKLE3O43900 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.06■□□□□ 0.32
PRICKLE3O43900 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.06■□□□□ 0.32
PRICKLE3O43900 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.06■□□□□ 0.32
PRICKLE3O43900 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.06■□□□□ 0.32
PRICKLE3O43900 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.06■□□□□ 0.32
PRICKLE3O43900 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRICKLE3O43900 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRICKLE3O43900 AC012317.2-201ENST00000623305 2251 ntBASIC17.05■□□□□ 0.32
PRICKLE3O43900 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRICKLE3O43900 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRICKLE3O43900 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRICKLE3O43900 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRICKLE3O43900 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRICKLE3O43900 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRICKLE3O43900 AL450487.1-201ENST00000426799 995 ntBASIC17.05■□□□□ 0.32
PRICKLE3O43900 AC005104.2-201ENST00000427818 678 ntBASIC17.05■□□□□ 0.32
PRICKLE3O43900 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PRICKLE3O43900 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms