Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.19■□□□□ 0.02
SSNA1O43805 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.19■□□□□ 0.02
SSNA1O43805 AC010980.2-201ENST00000587099 1412 ntBASIC15.19■□□□□ 0.02
SSNA1O43805 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.19■□□□□ 0.02
SSNA1O43805 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SSNA1O43805 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.19■□□□□ 0.02
SSNA1O43805 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.19■□□□□ 0.02
SSNA1O43805 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.19■□□□□ 0.02
SSNA1O43805 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.19■□□□□ 0.02
SSNA1O43805 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.19■□□□□ 0.02
SSNA1O43805 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.19■□□□□ 0.02
SSNA1O43805 AC092437.1-201ENST00000624794 1048 ntBASIC15.19■□□□□ 0.02
SSNA1O43805 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.19■□□□□ 0.02
SSNA1O43805 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SSNA1O43805 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SSNA1O43805 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SSNA1O43805 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSNA1O43805 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.18■□□□□ 0.02
SSNA1O43805 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.18■□□□□ 0.02
SSNA1O43805 KRT8P3-201ENST00000519669 1449 ntBASIC15.18■□□□□ 0.02
SSNA1O43805 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.18■□□□□ 0.02
SSNA1O43805 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.18■□□□□ 0.02
SSNA1O43805 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.18■□□□□ 0.02
SSNA1O43805 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
SSNA1O43805 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.18■□□□□ 0.02
SSNA1O43805 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.18■□□□□ 0.02
SSNA1O43805 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.18■□□□□ 0.02
SSNA1O43805 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SSNA1O43805 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.18■□□□□ 0.02
SSNA1O43805 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SSNA1O43805 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.18■□□□□ 0.02
SSNA1O43805 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
SSNA1O43805 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.18■□□□□ 0.02
SSNA1O43805 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.18■□□□□ 0.02
SSNA1O43805 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.18■□□□□ 0.02
SSNA1O43805 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.18■□□□□ 0.02
SSNA1O43805 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
SSNA1O43805 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SSNA1O43805 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.17■□□□□ 0.02
SSNA1O43805 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.17■□□□□ 0.02
SSNA1O43805 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SSNA1O43805 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SSNA1O43805 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.17■□□□□ 0.02
SSNA1O43805 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SSNA1O43805 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SSNA1O43805 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.17■□□□□ 0.02
SSNA1O43805 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 LSM12P1-201ENST00000411836 588 ntBASIC15.17■□□□□ 0.02
SSNA1O43805 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 KRT18P41-201ENST00000518924 1277 ntBASIC15.17■□□□□ 0.02
SSNA1O43805 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.17■□□□□ 0.02
SSNA1O43805 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.17■□□□□ 0.02
SSNA1O43805 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SSNA1O43805 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.17■□□□□ 0.02
SSNA1O43805 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSNA1O43805 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.17■□□□□ 0.02
SSNA1O43805 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SSNA1O43805 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms