Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC010460.3-201ENST00000511359 1579 ntBASIC20.03■□□□□ 0.8
CHMP2AO43633 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP2AO43633 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 AC018470.1-201ENST00000624790 3129 ntBASIC20.02■□□□□ 0.8
CHMP2AO43633 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CHMP2AO43633 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.02■□□□□ 0.8
CHMP2AO43633 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.02■□□□□ 0.8
CHMP2AO43633 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CHMP2AO43633 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.02■□□□□ 0.8
CHMP2AO43633 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2AO43633 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.02■□□□□ 0.79
CHMP2AO43633 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.02■□□□□ 0.79
CHMP2AO43633 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.02■□□□□ 0.79
CHMP2AO43633 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.02■□□□□ 0.79
CHMP2AO43633 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CHMP2AO43633 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CHMP2AO43633 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP2AO43633 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CHMP2AO43633 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CHMP2AO43633 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP2AO43633 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP2AO43633 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP2AO43633 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.01■□□□□ 0.79
CHMP2AO43633 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CHMP2AO43633 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP2AO43633 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.01■□□□□ 0.79
CHMP2AO43633 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP2AO43633 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP2AO43633 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.01■□□□□ 0.79
CHMP2AO43633 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2AO43633 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CHMP2AO43633 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
CHMP2AO43633 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20■□□□□ 0.79
CHMP2AO43633 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2AO43633 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2AO43633 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CHMP2AO43633 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2AO43633 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CHMP2AO43633 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHMP2AO43633 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2AO43633 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHMP2AO43633 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20■□□□□ 0.79
CHMP2AO43633 AC011467.2-201ENST00000598425 242 ntBASIC20■□□□□ 0.79
CHMP2AO43633 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20■□□□□ 0.79
CHMP2AO43633 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20■□□□□ 0.79
CHMP2AO43633 RNF165-205ENST00000588679 2904 ntBASIC20■□□□□ 0.79
CHMP2AO43633 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHMP2AO43633 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHMP2AO43633 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20■□□□□ 0.79
CHMP2AO43633 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20■□□□□ 0.79
CHMP2AO43633 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2AO43633 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2AO43633 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20■□□□□ 0.79
CHMP2AO43633 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20■□□□□ 0.79
CHMP2AO43633 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CHMP2AO43633 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2AO43633 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2AO43633 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP2AO43633 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CHMP2AO43633 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
CHMP2AO43633 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CHMP2AO43633 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CHMP2AO43633 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2AO43633 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2AO43633 AKR1C7P-201ENST00000305623 895 ntBASIC19.99■□□□□ 0.79
CHMP2AO43633 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2AO43633 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2AO43633 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP2AO43633 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CHMP2AO43633 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP2AO43633 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms