Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBFD1O14562 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
UBFD1O14562 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBFD1O14562 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBFD1O14562 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
UBFD1O14562 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.26■□□□□ 0.35
UBFD1O14562 HLA-F-220ENST00000434407 884 ntBASIC17.26■□□□□ 0.35
UBFD1O14562 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.26■□□□□ 0.35
UBFD1O14562 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.26■□□□□ 0.35
UBFD1O14562 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBFD1O14562 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
UBFD1O14562 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
UBFD1O14562 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBFD1O14562 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBFD1O14562 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.26■□□□□ 0.35
UBFD1O14562 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UBFD1O14562 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBFD1O14562 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UBFD1O14562 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBFD1O14562 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.25■□□□□ 0.35
UBFD1O14562 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.25■□□□□ 0.35
UBFD1O14562 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.25■□□□□ 0.35
UBFD1O14562 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
UBFD1O14562 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.25■□□□□ 0.35
UBFD1O14562 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.25■□□□□ 0.35
UBFD1O14562 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
UBFD1O14562 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UBFD1O14562 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
UBFD1O14562 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.25■□□□□ 0.35
UBFD1O14562 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.25■□□□□ 0.35
UBFD1O14562 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.25■□□□□ 0.35
UBFD1O14562 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.25■□□□□ 0.35
UBFD1O14562 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.25■□□□□ 0.35
UBFD1O14562 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
UBFD1O14562 AC009154.2-201ENST00000621177 724 ntBASIC17.25■□□□□ 0.35
UBFD1O14562 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
UBFD1O14562 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
UBFD1O14562 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
UBFD1O14562 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBFD1O14562 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
UBFD1O14562 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.24■□□□□ 0.35
UBFD1O14562 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.24■□□□□ 0.35
UBFD1O14562 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.24■□□□□ 0.35
UBFD1O14562 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.24■□□□□ 0.35
UBFD1O14562 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 AC124067.4-201ENST00000519691 2379 ntBASIC17.24■□□□□ 0.35
UBFD1O14562 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
UBFD1O14562 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UBFD1O14562 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
UBFD1O14562 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UBFD1O14562 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.24■□□□□ 0.35
UBFD1O14562 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.24■□□□□ 0.35
UBFD1O14562 AC112698.1-201ENST00000510299 916 ntBASIC17.24■□□□□ 0.35
UBFD1O14562 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UBFD1O14562 AC140113.3-201ENST00000605663 199 ntBASIC17.24■□□□□ 0.35
UBFD1O14562 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.24■□□□□ 0.35
UBFD1O14562 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.24■□□□□ 0.35
UBFD1O14562 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
UBFD1O14562 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 AL121761.2-201ENST00000598007 1648 ntBASIC17.24■□□□□ 0.35
UBFD1O14562 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.24■□□□□ 0.35
UBFD1O14562 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
UBFD1O14562 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBFD1O14562 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.24■□□□□ 0.35
UBFD1O14562 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBFD1O14562 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms