Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLDN4O14493 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN4O14493 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN4O14493 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLDN4O14493 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLDN4O14493 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLDN4O14493 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CLDN4O14493 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN4O14493 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLDN4O14493 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CLDN4O14493 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CLDN4O14493 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CLDN4O14493 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN4O14493 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CLDN4O14493 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 KRT18P56-201ENST00000507275 550 ntBASIC16.77■□□□□ 0.28
CLDN4O14493 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN4O14493 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.77■□□□□ 0.28
CLDN4O14493 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN4O14493 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN4O14493 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.77■□□□□ 0.28
CLDN4O14493 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.77■□□□□ 0.28
CLDN4O14493 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN4O14493 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN4O14493 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN4O14493 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN4O14493 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN4O14493 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.77■□□□□ 0.27
CLDN4O14493 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN4O14493 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.77■□□□□ 0.27
CLDN4O14493 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN4O14493 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CLDN4O14493 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN4O14493 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN4O14493 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN4O14493 KRT8P47-201ENST00000604727 1398 ntBASIC16.77■□□□□ 0.27
CLDN4O14493 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 NSUN5P1-202ENST00000421140 1535 ntBASIC16.76■□□□□ 0.27
CLDN4O14493 NSUN5P2-203ENST00000457352 1529 ntBASIC16.76■□□□□ 0.27
CLDN4O14493 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.76■□□□□ 0.27
CLDN4O14493 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CLDN4O14493 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 POM121L3P-201ENST00000419331 1163 ntBASIC16.76■□□□□ 0.27
CLDN4O14493 AC096633.1-201ENST00000422446 749 ntBASIC16.76■□□□□ 0.27
CLDN4O14493 IGHV3-47-201ENST00000425060 335 ntBASIC16.76■□□□□ 0.27
CLDN4O14493 NUS1P1-201ENST00000446295 882 ntBASIC16.76■□□□□ 0.27
CLDN4O14493 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLDN4O14493 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN4O14493 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN4O14493 LETM1P2-201ENST00000597330 2178 ntBASIC16.76■□□□□ 0.27
CLDN4O14493 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN4O14493 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN4O14493 AC125634.1-201ENST00000438758 1403 ntBASIC16.76■□□□□ 0.27
CLDN4O14493 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN4O14493 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CLDN4O14493 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN4O14493 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN4O14493 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms