Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CLDN5O00501 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLDN5O00501 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLDN5O00501 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN5O00501 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN5O00501 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN5O00501 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN5O00501 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CLDN5O00501 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CLDN5O00501 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN5O00501 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN5O00501 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN5O00501 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CLDN5O00501 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLDN5O00501 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN5O00501 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN5O00501 COX5BP2-201ENST00000392354 334 ntBASIC18.76■□□□□ 0.59
CLDN5O00501 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.76■□□□□ 0.59
CLDN5O00501 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN5O00501 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLDN5O00501 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN5O00501 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CLDN5O00501 AC104692.2-201ENST00000603054 253 ntBASIC18.76■□□□□ 0.59
CLDN5O00501 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN5O00501 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN5O00501 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN5O00501 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLDN5O00501 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLDN5O00501 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN5O00501 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN5O00501 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN5O00501 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
CLDN5O00501 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN5O00501 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN5O00501 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN5O00501 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CLDN5O00501 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN5O00501 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN5O00501 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN5O00501 AC026396.1-201ENST00000419388 421 ntBASIC18.75■□□□□ 0.59
CLDN5O00501 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN5O00501 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN5O00501 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.75■□□□□ 0.59
CLDN5O00501 AC116407.2-201ENST00000613639 860 ntBASIC18.75■□□□□ 0.59
CLDN5O00501 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN5O00501 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN5O00501 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN5O00501 AC012317.2-201ENST00000623305 2251 ntBASIC18.75■□□□□ 0.59
CLDN5O00501 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN5O00501 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
CLDN5O00501 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN5O00501 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN5O00501 RNF165-205ENST00000588679 2904 ntBASIC18.74■□□□□ 0.59
CLDN5O00501 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN5O00501 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN5O00501 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CLDN5O00501 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 FAAHP1-202ENST00000446499 1238 ntBASIC18.74■□□□□ 0.59
CLDN5O00501 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN5O00501 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN5O00501 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN5O00501 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.74■□□□□ 0.59
CLDN5O00501 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN5O00501 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.74■□□□□ 0.59
CLDN5O00501 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLDN5O00501 AL121912.1-201ENST00000603683 238 ntBASIC18.74■□□□□ 0.59
CLDN5O00501 AC008608.2-201ENST00000606089 416 ntBASIC18.74■□□□□ 0.59
CLDN5O00501 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CLDN5O00501 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN5O00501 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN5O00501 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN5O00501 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN5O00501 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN5O00501 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN5O00501 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN5O00501 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLDN5O00501 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN5O00501 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN5O00501 NOC2LP1-202ENST00000452600 2235 ntBASIC18.73■□□□□ 0.59
CLDN5O00501 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN5O00501 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN5O00501 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms