Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA3F8WFD2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 AL096828.2-201ENST00000567259 1965 ntBASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 RCN1P2-201ENST00000398357 915 ntBASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 AP000347.1-202ENST00000435868 847 ntBASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 AC132008.2-207ENST00000454517 770 ntBASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 TP73-AS1-210ENST00000637775 1455 ntBASIC16.21■□□□□ 0.19
NPIPA3F8WFD2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPIPA3F8WFD2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
NPIPA3F8WFD2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
NPIPA3F8WFD2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NPIPA3F8WFD2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.21■□□□□ 0.18
NPIPA3F8WFD2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.21■□□□□ 0.18
NPIPA3F8WFD2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.21■□□□□ 0.18
NPIPA3F8WFD2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NPIPA3F8WFD2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 REXO1L9P-201ENST00000604264 2108 ntBASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 AL390961.4-201ENST00000623958 2535 ntBASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NPIPA3F8WFD2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms