Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
C4orf47A7E2U8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C4orf47A7E2U8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C4orf47A7E2U8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C4orf47A7E2U8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C4orf47A7E2U8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
C4orf47A7E2U8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
C4orf47A7E2U8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
C4orf47A7E2U8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C4orf47A7E2U8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C4orf47A7E2U8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C4orf47A7E2U8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 AC006504.4-201ENST00000592118 1568 ntBASIC17.34■□□□□ 0.37
C4orf47A7E2U8 SIGLEC16-201ENST00000599858 1437 ntBASIC17.34■□□□□ 0.37
C4orf47A7E2U8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C4orf47A7E2U8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
C4orf47A7E2U8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
C4orf47A7E2U8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.33■□□□□ 0.37
C4orf47A7E2U8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
C4orf47A7E2U8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.33■□□□□ 0.37
C4orf47A7E2U8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
C4orf47A7E2U8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.33■□□□□ 0.37
C4orf47A7E2U8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
C4orf47A7E2U8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
C4orf47A7E2U8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
C4orf47A7E2U8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 AL139400.1-201ENST00000366220 510 ntBASIC17.33■□□□□ 0.36
C4orf47A7E2U8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 SPDYE21P-201ENST00000413323 827 ntBASIC17.33■□□□□ 0.36
C4orf47A7E2U8 ELK2BP-201ENST00000415014 1224 ntBASIC17.33■□□□□ 0.36
C4orf47A7E2U8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 AC004706.3-202ENST00000621574 984 ntBASIC17.33■□□□□ 0.36
C4orf47A7E2U8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.33■□□□□ 0.36
C4orf47A7E2U8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 PRSS29P-201ENST00000440800 595 ntBASIC17.32■□□□□ 0.36
C4orf47A7E2U8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 AD001527.2-201ENST00000622994 785 ntBASIC17.32■□□□□ 0.36
C4orf47A7E2U8 AC004790.2-201ENST00000623588 572 ntBASIC17.32■□□□□ 0.36
C4orf47A7E2U8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms