Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM88BA6NKF7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM88BA6NKF7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM88BA6NKF7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM88BA6NKF7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM88BA6NKF7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM88BA6NKF7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM88BA6NKF7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.53■□□□□ 0.88
TMEM88BA6NKF7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM88BA6NKF7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM88BA6NKF7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM88BA6NKF7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.52■□□□□ 0.87
TMEM88BA6NKF7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.52■□□□□ 0.87
TMEM88BA6NKF7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.52■□□□□ 0.87
TMEM88BA6NKF7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 AC026150.2-201ENST00000564693 1156 ntBASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEM88BA6NKF7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM88BA6NKF7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 AC018445.3-201ENST00000624177 1945 ntBASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 STK19B-204ENST00000512515 211 ntBASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM88BA6NKF7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 AC140658.5-201ENST00000438532 169 ntBASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 AC004890.2-204ENST00000481968 304 ntBASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 HILS1-202ENST00000545329 423 ntBASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 AL135744.1-201ENST00000565098 629 ntBASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 AC004233.3-201ENST00000607794 1269 ntBASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TMEM88BA6NKF7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms