Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 AC024909.3-201ENST00000611513 2257 ntBASIC12.55□□□□□ -0.4
LINC01546A6NGU7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 KRT18P23-201ENST00000435622 1283 ntBASIC12.55□□□□□ -0.4
LINC01546A6NGU7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 AL353708.3-201ENST00000610272 989 ntBASIC12.55□□□□□ -0.4
LINC01546A6NGU7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 AC138932.1-201ENST00000534164 6830 ntBASIC12.55□□□□□ -0.4
LINC01546A6NGU7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LINC01546A6NGU7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 AC092053.1-201ENST00000605787 1936 ntBASIC12.54□□□□□ -0.4
LINC01546A6NGU7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 AC092171.3-201ENST00000610122 2651 ntBASIC12.54□□□□□ -0.4
LINC01546A6NGU7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 MIR4758-201ENST00000577688 71 ntBASIC12.54□□□□□ -0.4
LINC01546A6NGU7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 AC008687.5-201ENST00000593746 558 ntBASIC12.54□□□□□ -0.4
LINC01546A6NGU7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC01546A6NGU7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms