Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC163A0A0D9SF12 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC163A0A0D9SF12 ANO7L1-203ENST00000602586 1720 ntBASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 COX20P2-201ENST00000452636 358 ntBASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 HLA-J-203ENST00000494367 1087 ntBASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 AC093028.1-201ENST00000622998 982 ntBASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCDC163A0A0D9SF12 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC163A0A0D9SF12 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC163A0A0D9SF12 AC005332.7-201ENST00000614046 2005 ntBASIC17.52■□□□□ 0.39
CCDC163A0A0D9SF12 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC163A0A0D9SF12 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 AC025580.3-201ENST00000617932 1424 ntBASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC163A0A0D9SF12 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 AL139400.1-201ENST00000366220 510 ntBASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 PTCHD3P3-201ENST00000403073 906 ntBASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 BCRP1-201ENST00000444246 691 ntBASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 AC025678.2-201ENST00000562061 970 ntBASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 OR7E47P-204ENST00000575924 449 ntBASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 AL353135.1-201ENST00000606729 504 ntBASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 AC019129.2-201ENST00000609837 1235 ntBASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms