Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 REXO1L9P-201ENST00000604264 2108 ntBASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 AC063926.3-201ENST00000624734 5658 ntBASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV9-2A0A087WT02 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 AC233702.5-201ENST00000584107 538 ntBASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV9-2A0A087WT02 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms