Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGA2Q9Y5H1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDHGA2Q9Y5H1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PCDHGA2Q9Y5H1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
PCDHGA2Q9Y5H1 MIR3960-201ENST00000583311 91 ntBASIC25.05■■□□□ 1.6
PCDHGA2Q9Y5H1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PCDHGA2Q9Y5H1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDHGA2Q9Y5H1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHGA2Q9Y5H1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGA2Q9Y5H1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
PCDHGA2Q9Y5H1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHGA2Q9Y5H1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGA2Q9Y5H1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.04■■□□□ 1.6
PCDHGA2Q9Y5H1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.04■■□□□ 1.6
PCDHGA2Q9Y5H1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGA2Q9Y5H1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.04■■□□□ 1.6
PCDHGA2Q9Y5H1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDHGA2Q9Y5H1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGA2Q9Y5H1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.03■■□□□ 1.6
PCDHGA2Q9Y5H1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGA2Q9Y5H1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDHGA2Q9Y5H1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGA2Q9Y5H1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGA2Q9Y5H1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGA2Q9Y5H1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDHGA2Q9Y5H1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGA2Q9Y5H1 AC103724.3-201ENST00000564481 992 ntBASIC25.02■■□□□ 1.6
PCDHGA2Q9Y5H1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHGA2Q9Y5H1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGA2Q9Y5H1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGA2Q9Y5H1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGA2Q9Y5H1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
PCDHGA2Q9Y5H1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
PCDHGA2Q9Y5H1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.01■■□□□ 1.59
PCDHGA2Q9Y5H1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
PCDHGA2Q9Y5H1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25■■□□□ 1.59
PCDHGA2Q9Y5H1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGA2Q9Y5H1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGA2Q9Y5H1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.99■■□□□ 1.59
PCDHGA2Q9Y5H1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGA2Q9Y5H1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGA2Q9Y5H1 AC008406.3-201ENST00000620001 1374 ntBASIC24.99■■□□□ 1.59
PCDHGA2Q9Y5H1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHGA2Q9Y5H1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHGA2Q9Y5H1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHGA2Q9Y5H1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.98■■□□□ 1.59
PCDHGA2Q9Y5H1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGA2Q9Y5H1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.97■■□□□ 1.59
PCDHGA2Q9Y5H1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.97■■□□□ 1.59
PCDHGA2Q9Y5H1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHGA2Q9Y5H1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGA2Q9Y5H1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.97■■□□□ 1.59
PCDHGA2Q9Y5H1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.96■■□□□ 1.59
PCDHGA2Q9Y5H1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGA2Q9Y5H1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGA2Q9Y5H1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGA2Q9Y5H1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGA2Q9Y5H1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PCDHGA2Q9Y5H1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.95■■□□□ 1.58
PCDHGA2Q9Y5H1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGA2Q9Y5H1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
PCDHGA2Q9Y5H1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGA2Q9Y5H1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
PCDHGA2Q9Y5H1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
PCDHGA2Q9Y5H1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGA2Q9Y5H1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGA2Q9Y5H1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.93■■□□□ 1.58
PCDHGA2Q9Y5H1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGA2Q9Y5H1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGA2Q9Y5H1 AC239859.2-201ENST00000444165 318 ntBASIC24.92■■□□□ 1.58
PCDHGA2Q9Y5H1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGA2Q9Y5H1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.92■■□□□ 1.58
PCDHGA2Q9Y5H1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGA2Q9Y5H1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
PCDHGA2Q9Y5H1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGA2Q9Y5H1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGA2Q9Y5H1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGA2Q9Y5H1 Z92544.1-202ENST00000571933 1220 ntBASIC24.9■■□□□ 1.58
PCDHGA2Q9Y5H1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHGA2Q9Y5H1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGA2Q9Y5H1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGA2Q9Y5H1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGA2Q9Y5H1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHGA2Q9Y5H1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.88■■□□□ 1.57
PCDHGA2Q9Y5H1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
PCDHGA2Q9Y5H1 AC139426.1-201ENST00000568218 2529 ntBASIC24.88■■□□□ 1.57
PCDHGA2Q9Y5H1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGA2Q9Y5H1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGA2Q9Y5H1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
PCDHGA2Q9Y5H1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHGA2Q9Y5H1 AC019171.1-201ENST00000601251 1056 ntBASIC24.87■■□□□ 1.57
PCDHGA2Q9Y5H1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGA2Q9Y5H1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGA2Q9Y5H1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.85■■□□□ 1.57
PCDHGA2Q9Y5H1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGA2Q9Y5H1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHGA2Q9Y5H1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGA2Q9Y5H1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
PCDHGA2Q9Y5H1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
PCDHGA2Q9Y5H1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms