Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
EXOSC1Q9Y3B2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EXOSC1Q9Y3B2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
EXOSC1Q9Y3B2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EXOSC1Q9Y3B2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
EXOSC1Q9Y3B2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EXOSC1Q9Y3B2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.86■■□□□ 1.09
EXOSC1Q9Y3B2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
EXOSC1Q9Y3B2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EXOSC1Q9Y3B2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EXOSC1Q9Y3B2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
EXOSC1Q9Y3B2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
EXOSC1Q9Y3B2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EXOSC1Q9Y3B2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
EXOSC1Q9Y3B2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.85■■□□□ 1.09
EXOSC1Q9Y3B2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
EXOSC1Q9Y3B2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.84■■□□□ 1.09
EXOSC1Q9Y3B2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.84■■□□□ 1.09
EXOSC1Q9Y3B2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
EXOSC1Q9Y3B2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EXOSC1Q9Y3B2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.83■■□□□ 1.09
EXOSC1Q9Y3B2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EXOSC1Q9Y3B2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.83■■□□□ 1.09
EXOSC1Q9Y3B2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EXOSC1Q9Y3B2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
EXOSC1Q9Y3B2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
EXOSC1Q9Y3B2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
EXOSC1Q9Y3B2 AC110285.7-201ENST00000624417 1536 ntBASIC21.82■■□□□ 1.08
EXOSC1Q9Y3B2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.82■■□□□ 1.08
EXOSC1Q9Y3B2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
EXOSC1Q9Y3B2 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.82■■□□□ 1.08
EXOSC1Q9Y3B2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
EXOSC1Q9Y3B2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
EXOSC1Q9Y3B2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.81■■□□□ 1.08
EXOSC1Q9Y3B2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EXOSC1Q9Y3B2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.81■■□□□ 1.08
EXOSC1Q9Y3B2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.8■■□□□ 1.08
EXOSC1Q9Y3B2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EXOSC1Q9Y3B2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EXOSC1Q9Y3B2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
EXOSC1Q9Y3B2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EXOSC1Q9Y3B2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.8■■□□□ 1.08
EXOSC1Q9Y3B2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
EXOSC1Q9Y3B2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EXOSC1Q9Y3B2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
EXOSC1Q9Y3B2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EXOSC1Q9Y3B2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXOSC1Q9Y3B2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXOSC1Q9Y3B2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EXOSC1Q9Y3B2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EXOSC1Q9Y3B2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.78■■□□□ 1.08
EXOSC1Q9Y3B2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.78■■□□□ 1.08
EXOSC1Q9Y3B2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EXOSC1Q9Y3B2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
EXOSC1Q9Y3B2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EXOSC1Q9Y3B2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.78■■□□□ 1.08
EXOSC1Q9Y3B2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EXOSC1Q9Y3B2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.77■■□□□ 1.08
EXOSC1Q9Y3B2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EXOSC1Q9Y3B2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.77■■□□□ 1.08
EXOSC1Q9Y3B2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EXOSC1Q9Y3B2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
EXOSC1Q9Y3B2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.76■■□□□ 1.07
EXOSC1Q9Y3B2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
EXOSC1Q9Y3B2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
EXOSC1Q9Y3B2 SUZ12P1-203ENST00000578195 985 ntBASIC21.76■■□□□ 1.07
EXOSC1Q9Y3B2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EXOSC1Q9Y3B2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EXOSC1Q9Y3B2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EXOSC1Q9Y3B2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EXOSC1Q9Y3B2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EXOSC1Q9Y3B2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EXOSC1Q9Y3B2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EXOSC1Q9Y3B2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.75■■□□□ 1.07
EXOSC1Q9Y3B2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EXOSC1Q9Y3B2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXOSC1Q9Y3B2 AC022211.4-201ENST00000625094 2161 ntBASIC21.74■■□□□ 1.07
EXOSC1Q9Y3B2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXOSC1Q9Y3B2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.74■■□□□ 1.07
EXOSC1Q9Y3B2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXOSC1Q9Y3B2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
EXOSC1Q9Y3B2 AL139125.2-201ENST00000623134 1869 ntBASIC21.74■■□□□ 1.07
EXOSC1Q9Y3B2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.74■■□□□ 1.07
EXOSC1Q9Y3B2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXOSC1Q9Y3B2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EXOSC1Q9Y3B2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EXOSC1Q9Y3B2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
EXOSC1Q9Y3B2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.73■■□□□ 1.07
EXOSC1Q9Y3B2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EXOSC1Q9Y3B2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EXOSC1Q9Y3B2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EXOSC1Q9Y3B2 AC138932.3-201ENST00000567634 1902 ntBASIC21.72■■□□□ 1.07
EXOSC1Q9Y3B2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
EXOSC1Q9Y3B2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.72■■□□□ 1.07
EXOSC1Q9Y3B2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EXOSC1Q9Y3B2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EXOSC1Q9Y3B2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EXOSC1Q9Y3B2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EXOSC1Q9Y3B2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.71■■□□□ 1.07
EXOSC1Q9Y3B2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms